RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 COL7A1Q02388 2944 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 SERPINE3A8MV23 424 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 SOCS1O15524 211 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 YPEL1O60688 119 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 NAPSAO96009 420 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 MOSP00540 346 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 PF4V1P10720 104 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 PSMD7P51665 324 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 TCTEX1D4Q5JR98 221 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 C10orf99Q6UWK7 81 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 C5orf24Q7Z6I8 188 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 SLC35E3Q7Z769 313 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 Q8N6K4 173 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 OR51D1Q8NGF3 324 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 IL1F10Q8WWZ1 152 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 YPEL2Q96QA6 119 aa14.55□□□□□ -0.08
CLN6-214ENST00000636314 ZNF736B4DX44 427 aaPredicted RBP14.54□□□□□ -0.08
CLN6-214ENST00000636314 PDCD5O14737 125 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 LANCL1O43813 399 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 MRPS14O60783 128 aaKnown RBP14.54□□□□□ -0.08
CLN6-214ENST00000636314 MYL9P24844 172 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 VAX1Q5SQQ9 334 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 HES5Q5TA89 166 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 FOXB2Q5VYV0 432 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 FOXRED2Q8IWF2 684 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 FAM89BQ8N5H3 189 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 OR2AK2Q8NG84 335 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 CHPT1Q8WUD6 406 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 FAM3DQ96BQ1 224 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 RIMS4Q9H426 269 aaPredicted RBP14.54□□□□□ -0.08
CLN6-214ENST00000636314 LIN7CQ9NUP9 197 aaKnown RBP14.54□□□□□ -0.08
CLN6-214ENST00000636314 STEAP1Q9UHE8 339 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 AK3Q9UIJ7 227 aa14.54□□□□□ -0.08
CLN6-214ENST00000636314 IGHG2P01859 326 aa14.53□□□□□ -0.08
CLN6-214ENST00000636314 VEGFCP49767 419 aa14.53□□□□□ -0.08
CLN6-214ENST00000636314 LSAMPQ13449 338 aa14.53□□□□□ -0.08
CLN6-214ENST00000636314 ZNF880Q6PDB4 577 aa14.53□□□□□ -0.08
CLN6-214ENST00000636314 OR8H1Q8NGG4 311 aa14.53□□□□□ -0.08
CLN6-214ENST00000636314 NOL4LQ96MY1 436 aaPredicted RBP14.53□□□□□ -0.08
CLN6-214ENST00000636314 C12orf4Q9NQ89 552 aa14.53□□□□□ -0.08
CLN6-214ENST00000636314 HSF4Q9ULV5 492 aa14.53□□□□□ -0.08
CLN6-214ENST00000636314 TRAV1-2A0A0B4J238 106 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 FOXI3A8MTJ6 420 aaPredicted RBP14.52□□□□□ -0.09
CLN6-214ENST00000636314 PF4P02776 101 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 CD33P20138 364 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 SLC35B1P78383 322 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 C2orf76Q3KRA6 126 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 LY6G6FQ5SQ64 297 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 CD200R1LQ6Q8B3 271 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 ZNF329Q86UD4 541 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 Q8N9W7 124 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 OR56B1Q8NGI3 324 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 ARHGAP5-AS1Q96IT6 56 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 RASL11BQ9BPW5 248 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 HDHD3Q9BSH5 251 aaPredicted RBP14.52□□□□□ -0.09
CLN6-214ENST00000636314 ABCG5Q9H222 651 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 LINC00527Q9UJ94 153 aa14.52□□□□□ -0.09
CLN6-214ENST00000636314 TRBV6-6A0A0A6YYG2 114 aa14.51□□□□□ -0.09
CLN6-214ENST00000636314 TRDV1A0A1B0GX56 115 aa14.51□□□□□ -0.09
CLN6-214ENST00000636314 DENRO43583 198 aaKnown RBP14.51□□□□□ -0.09
CLN6-214ENST00000636314 PSMB9P28065 219 aa14.51□□□□□ -0.09
CLN6-214ENST00000636314 GPR12P47775 334 aa14.51□□□□□ -0.09
CLN6-214ENST00000636314 OR10A3P58181 314 aa14.51□□□□□ -0.09
CLN6-214ENST00000636314 HLA-DRB3P79483 266 aa14.51□□□□□ -0.09
CLN6-214ENST00000636314 ODF3L1Q8IXM7 274 aa14.51□□□□□ -0.09
CLN6-214ENST00000636314 FCGR1BQ92637 280 aa14.51□□□□□ -0.09
CLN6-214ENST00000636314 S1PR3Q99500 378 aa14.51□□□□□ -0.09
CLN6-214ENST00000636314 MRPL20Q9BYC9 149 aaKnown RBP14.51□□□□□ -0.09
CLN6-214ENST00000636314 MGAT4AQ9UM21 535 aa14.51□□□□□ -0.09
CLN6-214ENST00000636314 SAA2-SAA4A0A096LPE2 208 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 TMEM272A0A1B0GTI8 110 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 SHISA3A0PJX4 238 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 AP4M1O00189 453 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 LDLRAD4O15165 306 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 ST8SIA5O15466 376 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 SAA2P0DJI9 122 aaPredicted RBP14.5□□□□□ -0.09
CLN6-214ENST00000636314 IGLL1P15814 213 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 GALP22466 123 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 UBE2UQ5VVX9 321 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 C22orf42Q6IC83 251 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 ZNF833PQ6ZTB9 187 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 SPARTQ8N0X7 666 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 STPG2Q8N412 459 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 RBMXL1Q96E39 390 aaKnown RBP14.5□□□□□ -0.09
CLN6-214ENST00000636314 CMSS1Q9BQ75 279 aaKnown RBP14.5□□□□□ -0.09
CLN6-214ENST00000636314 PECRQ9BY49 303 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 IFI27L2Q9H2X8 130 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 PLSCR3Q9NRY6 295 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 SLC23A1Q9UHI7 598 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 RAB22AQ9UL26 194 aa14.5□□□□□ -0.09
CLN6-214ENST00000636314 IFITM5A6NNB3 132 aa14.49□□□□□ -0.09
CLN6-214ENST00000636314 RAB3BP20337 219 aa14.49□□□□□ -0.09
CLN6-214ENST00000636314 OR3A3P47888 321 aa14.49□□□□□ -0.09
CLN6-214ENST00000636314 TMEM50BP56557 158 aa14.49□□□□□ -0.09
CLN6-214ENST00000636314 MRPS15P82914 257 aaKnown RBP14.49□□□□□ -0.09
CLN6-214ENST00000636314 MMDQ15546 238 aa14.49□□□□□ -0.09
CLN6-214ENST00000636314 C11orf87Q6NUJ2 197 aa14.49□□□□□ -0.09
CLN6-214ENST00000636314 FAM71F2Q6NXP2 309 aa14.49□□□□□ -0.09
CLN6-214ENST00000636314 FAM71E2Q8N5Q1 922 aa14.49□□□□□ -0.09
CLN6-214ENST00000636314 COMMD1Q8N668 190 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms