RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 RAP2AP10114 183 aa13.62□□□□□ -0.23
CLN6-212ENST00000636020 ATF4P18848 351 aaPredicted RBP13.62□□□□□ -0.23
CLN6-212ENST00000636020 ALDH3A2P51648 485 aa13.62□□□□□ -0.23
CLN6-212ENST00000636020 PTGES3Q15185 160 aaKnown RBP13.62□□□□□ -0.23
CLN6-212ENST00000636020 RCN1Q15293 331 aa13.62□□□□□ -0.23
CLN6-212ENST00000636020 TMEM30BQ3MIR4 351 aa13.62□□□□□ -0.23
CLN6-212ENST00000636020 ZNF497Q6ZNH5 498 aa13.62□□□□□ -0.23
CLN6-212ENST00000636020 ODF3L1Q8IXM7 274 aa13.62□□□□□ -0.23
CLN6-212ENST00000636020 TCEANCQ8N8B7 351 aa13.62□□□□□ -0.23
CLN6-212ENST00000636020 OR13C3Q8NGS6 347 aa13.62□□□□□ -0.23
CLN6-212ENST00000636020 OR10K1Q8NGX5 313 aa13.62□□□□□ -0.23
CLN6-212ENST00000636020 GNG8Q9UK08 70 aa13.62□□□□□ -0.23
CLN6-212ENST00000636020 A0A0G2JLM5 398 aa13.61□□□□□ -0.23
CLN6-212ENST00000636020 SPINT2O43291 252 aa13.61□□□□□ -0.23
CLN6-212ENST00000636020 OR7C1O76099 320 aaPredicted RBP13.61□□□□□ -0.23
CLN6-212ENST00000636020 OR2A4O95047 310 aa13.61□□□□□ -0.23
CLN6-212ENST00000636020 TP53I3Q53FA7 332 aa13.61□□□□□ -0.23
CLN6-212ENST00000636020 TMEM163Q8TC26 289 aa13.61□□□□□ -0.23
CLN6-212ENST00000636020 PHLDA1Q8WV24 401 aaPredicted RBP13.61□□□□□ -0.23
CLN6-212ENST00000636020 GGTLC1Q9BX51 225 aa13.61□□□□□ -0.23
CLN6-212ENST00000636020 AIPO00170 330 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 TRBV12-3P01733 135 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 NANOS3P60323 173 aaKnown RBP13.6□□□□□ -0.23
CLN6-212ENST00000636020 PLGLAQ15195 96 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 ZNF562Q6V9R5 426 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 ASCL4Q6XD76 172 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 LINC00336Q6ZUF6 198 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 POC5Q8NA72 575 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 OR10H4Q8NGA5 316 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 OR1L1Q8NH94 360 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 RAB9BQ9NP90 201 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 ZNF355PQ9NSJ1 428 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 PEMTQ9UBM1 199 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 PEF1Q9UBV8 284 aaKnown RBP13.6□□□□□ -0.23
CLN6-212ENST00000636020 ST3GAL6Q9Y274 331 aa13.6□□□□□ -0.23
CLN6-212ENST00000636020 H3BUA1 57 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 GABRPO00591 440 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 GNGT2O14610 69 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 SULT1B1O43704 296 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 MITFO75030 526 aaPredicted RBP13.59□□□□□ -0.23
CLN6-212ENST00000636020 HTR3BO95264 441 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 HBZP02008 142 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 RSU1Q15404 277 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 MORN2Q502X0 79 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 NHLRC3Q5JS37 347 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 ZNF343Q6P1L6 599 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 FDX2Q6P4F2 183 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 ZNF833PQ6ZTB9 187 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 FAM220AQ7Z4H9 259 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 GID4Q8IVV7 300 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 TNFAIP8L1Q8WVP5 186 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 PRRG3Q9BZD7 231 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 WARS2Q9UGM6 360 aaKnown RBP13.59□□□□□ -0.23
CLN6-212ENST00000636020 AP4S1Q9Y587 144 aa13.59□□□□□ -0.23
CLN6-212ENST00000636020 MSGN1A6NI15 193 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 AIREO43918 545 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 RBM11P57052 281 aaKnown RBP13.58□□□□□ -0.24
CLN6-212ENST00000636020 ADARB1P78563 741 aaKnown RBP13.58□□□□□ -0.24
CLN6-212ENST00000636020 ZNF85Q03923 595 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 ALKBH1Q13686 389 aaKnown RBP13.58□□□□□ -0.24
CLN6-212ENST00000636020 RPEL1Q2QD12 228 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 DEFB114Q30KQ6 69 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 LPCAT4Q643R3 524 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 PRR18Q8N4B5 295 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 OR5D14Q8NGL3 314 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 IL4I1Q96RQ9 567 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 CLCC1Q96S66 551 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 ABHD14AQ9BUJ0 271 aa13.58□□□□□ -0.24
CLN6-212ENST00000636020 LOC102724200A0A096LPH7 203 aaPredicted RBP13.57□□□□□ -0.24
CLN6-212ENST00000636020 GEMIN2O14893 280 aaKnown RBP13.57□□□□□ -0.24
CLN6-212ENST00000636020 HOXB6P17509 224 aaKnown RBP13.57□□□□□ -0.24
CLN6-212ENST00000636020 OR3A3P47888 321 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 GUCA2BQ16661 112 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 SYT6Q5T7P8 510 aaPredicted RBP13.57□□□□□ -0.24
CLN6-212ENST00000636020 FAM131AQ6UXB0 335 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 SERPINA12Q8IW75 414 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 PQLC1Q8N2U9 271 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 OR5T1Q8NG75 326 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 NEK7Q8TDX7 302 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 OR2S2Q9NQN1 319 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 ZC4H2Q9NQZ6 224 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 RCC2Q9P258 522 aaKnown RBP13.57□□□□□ -0.24
CLN6-212ENST00000636020 TRAPPC2LQ9UL33 140 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 TP53TG1Q9Y2A0 90 aa13.57□□□□□ -0.24
CLN6-212ENST00000636020 FADS2O95864 444 aaKnown RBP13.56□□□□□ -0.24
CLN6-212ENST00000636020 BMI1P35226 326 aa13.56□□□□□ -0.24
CLN6-212ENST00000636020 CCR9P51686 369 aa13.56□□□□□ -0.24
CLN6-212ENST00000636020 GNMTQ14749 295 aa13.56□□□□□ -0.24
CLN6-212ENST00000636020 ATAD3CQ5T2N8 411 aa13.56□□□□□ -0.24
CLN6-212ENST00000636020 PARP16Q8N5Y8 322 aa13.56□□□□□ -0.24
CLN6-212ENST00000636020 OR52N1Q8NH53 320 aa13.56□□□□□ -0.24
CLN6-212ENST00000636020 DNAJC9Q8WXX5 260 aa13.56□□□□□ -0.24
CLN6-212ENST00000636020 GPER1Q99527 375 aa13.56□□□□□ -0.24
CLN6-212ENST00000636020 OR4C45A6NMZ5 311 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 BAG2O95816 211 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 CA2P00918 260 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 FCGR1AP12314 374 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 AADACP22760 399 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 FASP25445 335 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 C6orf183Q5T699 404 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms