RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 ELLP55199 621 aaPredicted RBP9.06□□□□□ -0.96
PSPC1-207ENST00000635251 LRRC75BQ2VPJ9 315 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 ZNF497Q6ZNH5 498 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 BCL2L2Q92843 193 aaPredicted RBP9.06□□□□□ -0.96
PSPC1-207ENST00000635251 PSMG3Q9BT73 122 aaPredicted RBP9.06□□□□□ -0.96
PSPC1-207ENST00000635251 HIPK2Q9H2X6 1198 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 RNF212BA8MTL3 300 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 B4DEV8 164 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 C21orf140B9A014 251 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 CDIPTO14735 213 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 PPIHO43447 177 aaKnown RBP9.06□□□□□ -0.96
PSPC1-207ENST00000635251 WNT2P09544 360 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 HOXA5P20719 270 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 S100A2P29034 98 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 MRPL49Q13405 166 aaKnown RBP9.06□□□□□ -0.96
PSPC1-207ENST00000635251 ZNF585BQ52M93 769 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 WDR86Q86TI4 376 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 DRAM1Q8N682 238 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 OR10G4Q8NGN3 311 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 ARRDC1-AS1Q9H2J1 176 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 CDH20Q9HBT6 801 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 TREM2Q9NZC2 230 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 DOK5Q9P104 306 aa9.06□□□□□ -0.96
PSPC1-207ENST00000635251 KMT2EQ8IZD2 1858 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 UBE2L5PA0A1B0GUS4 154 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 C19orf67A6NJJ6 358 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 CEBPZOSA8MTT3 80 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 CLDN1O95832 211 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 IFNA1P01562 189 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 GRPP07492 148 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 MPLP40238 635 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 CDX1P47902 265 aaPredicted RBP9.05□□□□□ -0.96
PSPC1-207ENST00000635251 PPP1CBP62140 327 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 SERF2P84101 59 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 ZNF726P1Q15940 193 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 TMEM41BQ5BJD5 291 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 FREM1Q5H8C1 2179 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 FAM90A2PQ658T7 463 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 OR8G2PQ6IF36 304 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.05□□□□□ -0.96
PSPC1-207ENST00000635251 HAPLN4Q86UW8 402 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 OR2J1Q9GZK6 312 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 KCNIP1Q9NZI2 227 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 MAP1LC3B2A6NCE7 125 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 CELA3BP08861 270 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 UBE2NP61088 152 aaKnown RBP9.05□□□□□ -0.96
PSPC1-207ENST00000635251 ERVS71-1P61550 626 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 SLC38A11Q08AI6 406 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 PNRC1Q12796 327 aaPredicted RBP9.05□□□□□ -0.96
PSPC1-207ENST00000635251 HNF4GQ14541 408 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 SSX7Q7RTT5 188 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 C1orf87Q8N0U7 546 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 FGFRL1Q8N441 504 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 MBD3L1Q8WWY6 194 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 RCC1LQ96I51 464 aaKnown RBP9.05□□□□□ -0.96
PSPC1-207ENST00000635251 OR4C12Q96R67 309 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 MAP1LC3BQ9GZQ8 125 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 WDR61Q9GZS3 305 aaKnown RBP9.05□□□□□ -0.96
PSPC1-207ENST00000635251 GP6Q9HCN6 339 aa9.05□□□□□ -0.96
PSPC1-207ENST00000635251 DOCK10Q96BY6 2186 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 TRAV20A0A0B4J274 112 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 SMPD2O60906 423 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 TRGC2P03986 189 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 CD46P15529 392 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 IDH3GP51553 393 aaPredicted RBP9.04□□□□□ -0.96
PSPC1-207ENST00000635251 NKX6-1P78426 367 aaPredicted RBP9.04□□□□□ -0.96
PSPC1-207ENST00000635251 OR2B11Q5JQS5 317 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 MYPOPQ86VE0 399 aaPredicted RBP9.04□□□□□ -0.96
PSPC1-207ENST00000635251 PINX1Q96BK5 328 aaKnown RBP9.04□□□□□ -0.96
PSPC1-207ENST00000635251 FAM210BQ96KR6 192 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 GGACTQ9BVM4 153 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 SLC39A9Q9NUM3 307 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 GAR1Q9NY12 217 aaKnown RBP9.04□□□□□ -0.96
PSPC1-207ENST00000635251 IL17BQ9UHF5 180 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 VAX2Q9UIW0 290 aa9.04□□□□□ -0.96
PSPC1-207ENST00000635251 COL27A1Q8IZC6 1860 aaPredicted RBP9.04□□□□□ -0.96
PSPC1-207ENST00000635251 TRGV5A0A0B4J1U4 118 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 A0A1W2PNU3 283 aaPredicted RBP9.03□□□□□ -0.96
PSPC1-207ENST00000635251 CLDN34H7C241 214 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 CYB5R3P00387 301 aaPredicted RBP9.03□□□□□ -0.96
PSPC1-207ENST00000635251 PGA5P0DJD9 388 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 RAC2P15153 192 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 CEBPDP49716 269 aaPredicted RBP9.03□□□□□ -0.96
PSPC1-207ENST00000635251 ERVK11-1P61568 191 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 DBX2Q6ZNG2 339 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 MRGPRGQ86SM5 289 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 SLC25A40Q8TBP6 338 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 TAF15Q92804 592 aaKnown RBP eCLIP9.03□□□□□ -0.96
PSPC1-207ENST00000635251 LHX4Q969G2 390 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 P2RX4Q99571 388 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 OR2D2Q9H210 308 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 RBKSQ9H477 322 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 WIPI2Q9Y4P8 454 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 HIST1H2BKO60814 126 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 ZNF737O75373 536 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 HAND1O96004 215 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 KRASP01116 189 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 HIST1H2BJP06899 126 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 ZNF883P0CG24 379 aa9.03□□□□□ -0.96
PSPC1-207ENST00000635251 HIST1H2BOP23527 126 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms