RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 KCNK7Q9Y2U2 307 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 F8P00451 2351 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 ACANP16112 2415 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 A0A096LNT2 108 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 DBX1A6NMT0 343 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 NUDT19A8MXV4 375 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 BCL2L11O43521 198 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 DUS4LO95620 317 aaKnown RBP11.96□□□□□ -0.5
LINC00339-208ENST00000634934 CD34P28906 385 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 KCNJ3P48549 501 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 NPY4RP50391 375 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 CYCSP99999 105 aaKnown RBP11.96□□□□□ -0.5
LINC00339-208ENST00000634934 ARFRP1Q13795 201 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 UQCC3Q6UW78 93 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 ACOT7LQ6ZUV0 252 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 STOML3Q8TAV4 291 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 ST8SIA2Q92186 375 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 SCGB3A2Q96PL1 93 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 SLC6A7Q99884 636 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 LPAR2Q9HBW0 351 aa11.96□□□□□ -0.5
LINC00339-208ENST00000634934 CHMP1AQ9HD42 196 aaPredicted RBP11.96□□□□□ -0.5
LINC00339-208ENST00000634934 TMA7Q9Y2S6 64 aaKnown RBP11.96□□□□□ -0.5
LINC00339-208ENST00000634934 TEP1Q99973 2627 aaKnown RBP11.95□□□□□ -0.5
LINC00339-208ENST00000634934 MEX3AA1L020 520 aaKnown RBP11.95□□□□□ -0.5
LINC00339-208ENST00000634934 SERPINE3A8MV23 424 aa11.95□□□□□ -0.5
LINC00339-208ENST00000634934 FAM157AC9JC47 383 aa11.95□□□□□ -0.5
LINC00339-208ENST00000634934 CSN2P05814 226 aa11.95□□□□□ -0.5
LINC00339-208ENST00000634934 ZFP36P26651 326 aaKnown RBP11.95□□□□□ -0.5
LINC00339-208ENST00000634934 GLIPR1P48060 266 aa11.95□□□□□ -0.5
LINC00339-208ENST00000634934 LCN2P80188 198 aa11.95□□□□□ -0.5
LINC00339-208ENST00000634934 LOXL1Q08397 574 aaPredicted RBP11.95□□□□□ -0.5
LINC00339-208ENST00000634934 ZNF546Q86UE3 836 aa11.95□□□□□ -0.5
LINC00339-208ENST00000634934 COQ2Q96H96 371 aa11.95□□□□□ -0.5
LINC00339-208ENST00000634934 PHB2Q99623 299 aa11.95□□□□□ -0.5
LINC00339-208ENST00000634934 CMSS1Q9BQ75 279 aaKnown RBP11.95□□□□□ -0.5
LINC00339-208ENST00000634934 HDHD3Q9BSH5 251 aaPredicted RBP11.95□□□□□ -0.5
LINC00339-208ENST00000634934 COMMD9Q9P000 198 aa11.95□□□□□ -0.5
LINC00339-208ENST00000634934 ZANQ9Y493 2812 aa11.95□□□□□ -0.5
LINC00339-208ENST00000634934 LOC105371242A0A075B767 164 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 TMEM30CPA0ZSE6 113 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 C9orf170A2RU37 121 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 GPR37O15354 613 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 SIX6O95475 246 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 LYL1P12980 280 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 RPL31P62899 125 aaKnown RBP11.94□□□□□ -0.5
LINC00339-208ENST00000634934 MALRD1Q5VYJ5 2156 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 ZNF497Q6ZNH5 498 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 HOGA1Q86XE5 327 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 SLC38A6Q8IZM9 456 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 FAM185AQ8N0U4 392 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 NUDCD2Q8WVJ2 157 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 WDR89Q96FK6 387 aaPredicted RBP11.94□□□□□ -0.5
LINC00339-208ENST00000634934 OCSTAMPQ9BR26 566 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 NMES1Q9C002 83 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 C19orf12Q9NSK7 152 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 VSIG4Q9Y279 399 aa11.94□□□□□ -0.5
LINC00339-208ENST00000634934 MED13LQ71F56 2210 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 TRAV39A0A0B4J263 110 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 KANTRA0A1W2PQU2 76 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 ODAMA1E959 279 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 H7C1Q1 480 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 SMAD7O15105 426 aaKnown RBP11.93□□□□□ -0.5
LINC00339-208ENST00000634934 FOXH1O75593 365 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 HLA-AP01891 365 aaKnown RBP11.93□□□□□ -0.5
LINC00339-208ENST00000634934 FCER2P06734 321 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 SLC35E4Q6ICL7 350 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 TRAPPC6BQ86SZ2 158 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 OR4K15Q8NH41 348 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 MRGPRFQ96AM1 343 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 DCTN5Q9BTE1 182 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 C12orf4Q9NQ89 552 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 TRAPPC2LQ9UL33 140 aa11.93□□□□□ -0.5
LINC00339-208ENST00000634934 hADV38S2A0JD32 116 aa11.92□□□□□ -0.5
LINC00339-208ENST00000634934 RAB19A4D1S5 217 aa11.92□□□□□ -0.5
LINC00339-208ENST00000634934 KIAA1324LA8MWY0 1029 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-208ENST00000634934 C22orf46C9J442 243 aa11.92□□□□□ -0.5
LINC00339-208ENST00000634934 M0QYG6 137 aa11.92□□□□□ -0.5
LINC00339-208ENST00000634934 GLP1RP43220 463 aa11.92□□□□□ -0.5
LINC00339-208ENST00000634934 SURF2Q15527 256 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-208ENST00000634934 ALKAL2Q6UX46 152 aa11.92□□□□□ -0.5
LINC00339-208ENST00000634934 TMEM17Q86X19 198 aa11.92□□□□□ -0.5
LINC00339-208ENST00000634934 MRPL30Q8TCC3 161 aaKnown RBP11.92□□□□□ -0.5
LINC00339-208ENST00000634934 LINC00052Q96N35 136 aa11.92□□□□□ -0.5
LINC00339-208ENST00000634934 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
LINC00339-208ENST00000634934 RIMS4Q9H426 269 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-208ENST00000634934 RPUSD1Q9UJJ7 312 aaKnown RBP11.92□□□□□ -0.5
LINC00339-208ENST00000634934 TRGV10A0A0A0MS01 117 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 TRBV23-1A0A0A0MS06 115 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 MEIS3P1A6NDR6 274 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 MPTX1A8MV57 137 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 TEX46H3BTG2 121 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 SSX5O60225 188 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 NAPSAO96009 420 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 CD99P14209 185 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 ECI1P42126 302 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 PAX5Q02548 391 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 MEF2CQ06413 473 aaPredicted RBP11.91□□□□□ -0.5
LINC00339-208ENST00000634934 TUSC1Q2TAM9 212 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 TMEM128Q5BJH2 165 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 COQ8AQ8NI60 647 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms