RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ZNF134P52741 427 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 TMBIM6P55061 237 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 RAG2P55895 527 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 RELBQ01201 579 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 LY6EQ16553 131 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 Q6ZS49 121 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 OR2AK2Q8NG84 335 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 OR4A4PQ8NGN8 299 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 ST6GALNAC6Q969X2 333 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 DCSTAMPQ9H295 470 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 SLC23A1Q9UHI7 598 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 MMP24Q9Y5R2 645 aa11.86□□□□□ -0.51
CDC42BPB-209ENST00000634889 ITGB1BP1O14713 200 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 SCTP09683 121 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 GNG2P59768 71 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 HABP2Q14520 560 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 CCBE1Q6UXH8 406 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 C12orf54Q6X4T0 127 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 C16orf82Q7Z2V1 217 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 C5orf24Q7Z6I8 188 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 THNSL2Q86YJ6 484 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 CLVS1Q8IUQ0 354 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 SAMD12Q8N8I0 201 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 DTX3Q8N9I9 347 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 RTN4IP1Q8WWV3 396 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 AP3S1Q92572 193 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 S100A16Q96FQ6 103 aaKnown RBP11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 CMTM3Q96MX0 182 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 NPFFR1Q9GZQ6 430 aa11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 RANBP3Q9H6Z4 567 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-209ENST00000634889 IGHV1-3A0A0C4DH29 117 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 TMEM235A6NFC5 223 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 FAM90A9PA6NNJ1 464 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 TIMM23O14925 209 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 FABP7O15540 132 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 HSPA12AO43301 675 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 XRCC3O43542 346 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 CHST1O43916 411 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 TSPAN9O75954 239 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 FAM106CPP0CH98 169 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 EDARADDQ8WWZ3 215 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 CFHR4Q92496 578 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 AKR1E2Q96JD6 320 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 CABLES2Q9BTV7 478 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 GHITMQ9H3K2 345 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 C16orf95Q9H693 158 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 BEX1Q9HBH7 125 aa11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 ELF5Q9UKW6 265 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPB-209ENST00000634889 TRAV18A0A075B6X5 111 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 IGKV1-6A0A0C4DH72 117 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 LANCL1O43813 399 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 NOL3O60936 208 aaKnown RBP11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 ZNF182P17025 639 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 HERPUD1Q15011 391 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 FAM71F2Q6NXP2 309 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 MZT2AQ6P582 158 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 Q6ZSV7 163 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 TMEM219Q86XT9 240 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 TGIF2LXQ8IUE1 241 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 LYG1Q8N1E2 194 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 DRAM1Q8N682 238 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 OR4C13Q8NGP0 309 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 OR56B4Q8NH76 319 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 NUDCD2Q8WVJ2 157 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 TAF15Q92804 592 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 TOLLIPQ9H0E2 274 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 PIPOXQ9P0Z9 390 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 OR1A1Q9P1Q5 309 aa11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 ZNF230Q9UIE0 474 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPB-209ENST00000634889 TRBV6-7A0A0A0MS04 114 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 CLPSL1A2RUU4 121 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 OR2F2O95006 317 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 APOA1P02647 267 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 GSTT2P0CG29 244 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 GSTT2BP0CG30 244 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 MDKP21741 143 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 SOX6P35712 828 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 CEACAM6P40199 344 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 REG1BP48304 166 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 TMEM69Q5SWH9 247 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 ODF3L1Q8IXM7 274 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 IZUMO1Q8IYV9 350 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 OR10J5Q8NHC4 309 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 RBM14Q96PK6 669 aaKnown RBP11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 ST6GALNAC5Q9BVH7 336 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 IFI27L2Q9H2X8 130 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 AUNIPQ9H7T9 357 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 COMMD3Q9UBI1 195 aa11.82□□□□□ -0.52
CDC42BPB-209ENST00000634889 SAA2-SAA4A0A096LPE2 208 aa11.81□□□□□ -0.52
CDC42BPB-209ENST00000634889 M0QZK8 103 aa11.81□□□□□ -0.52
CDC42BPB-209ENST00000634889 RAB29O14966 203 aa11.81□□□□□ -0.52
CDC42BPB-209ENST00000634889 SSX5O60225 188 aa11.81□□□□□ -0.52
CDC42BPB-209ENST00000634889 SNRNP70P08621 437 aaKnown RBP11.81□□□□□ -0.52
CDC42BPB-209ENST00000634889 SAA2P0DJI9 122 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPB-209ENST00000634889 CD24P25063 80 aa11.81□□□□□ -0.52
CDC42BPB-209ENST00000634889 CD1BP29016 333 aa11.81□□□□□ -0.52
CDC42BPB-209ENST00000634889 EBI3Q14213 229 aa11.81□□□□□ -0.52
CDC42BPB-209ENST00000634889 SPCS2Q15005 226 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms