RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 LOC100506127A0A0U1RQW1 187 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 SMIM30A4D0T7 59 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 SH2D7A6NKC9 451 aaPredicted RBP12.51□□□□□ -0.41
LINC00339-207ENST00000634712 NCBP2LA6PVI3 153 aaKnown RBP12.51□□□□□ -0.41
LINC00339-207ENST00000634712 FOXI3A8MTJ6 420 aaPredicted RBP12.51□□□□□ -0.41
LINC00339-207ENST00000634712 HSPA12AO43301 675 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 CD3GP09693 182 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 CD36P16671 472 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 CD1BP29016 333 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 PLA2G7Q13093 441 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 TMEM95Q3KNT9 176 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 FBLN7Q53RD9 439 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 LY6G6FQ5SQ64 297 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 OR10R2Q8NGX6 335 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 MGAM2Q2M2H8 2515 aa12.51□□□□□ -0.41
LINC00339-207ENST00000634712 PKD1L1Q8TDX9 2849 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 A0A075B6Q4 140 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 A0A087WXM4 84 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 A0A0B4J203 849 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 FGF16O43320 207 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 LANCL1O43813 399 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 TNFAIP8O95379 198 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 SLC2A2P11168 524 aaPredicted RBP12.5□□□□□ -0.41
LINC00339-207ENST00000634712 ZNF137PP52743 207 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 PLAC9Q5JTB6 97 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 IZUMO1Q8IYV9 350 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 TSPAN14Q8NG11 270 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 FAM110DQ8TAY7 271 aaPredicted RBP12.5□□□□□ -0.41
LINC00339-207ENST00000634712 PTX4Q96A99 478 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 EAF1Q96JC9 268 aaPredicted RBP12.5□□□□□ -0.41
LINC00339-207ENST00000634712 WNT10AQ9GZT5 417 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 ATG5Q9H1Y0 275 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 Q9N2K0 584 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 SLC23A1Q9UHI7 598 aa12.5□□□□□ -0.41
LINC00339-207ENST00000634712 MOSP00540 346 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 AMY1AP04745 511 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 AMY2AP04746 511 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 CD28P10747 220 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 ZBTB25P24278 435 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 SDC2P34741 201 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 CEACAM6P40199 344 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 HLA-DRB3P79483 266 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 EBI3Q14213 229 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 NSUN5P1Q3KNT7 163 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 NR2C2APQ86WQ0 139 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 OR5AU1Q8NGC0 362 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 DAPK2Q9UIK4 370 aa12.49□□□□□ -0.41
LINC00339-207ENST00000634712 TSPAN15O95858 294 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 GNB3P16520 340 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 TALDO1P37837 337 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 MXD1Q05195 221 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 ARFRP1Q13795 201 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 ARL6IP1Q15041 203 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 MOGAT2Q3SYC2 334 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 TIMM50Q3ZCQ8 353 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 C5orf56Q8N8D9 126 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 EDARADDQ8WWZ3 215 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 S1PR3Q99500 378 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 PIPOXQ9P0Z9 390 aa12.48□□□□□ -0.41
LINC00339-207ENST00000634712 TRDCB7Z8K6 153 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 RAB27BO00194 218 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 RAB29O14966 203 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 ST8SIA5O15466 376 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 SCTP09683 121 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 HIST1H1DP16402 221 aaKnown RBP12.47□□□□□ -0.41
LINC00339-207ENST00000634712 SFXN4Q6P4A7 337 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 Q6ZPA2 131 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 OR8H1Q8NGG4 311 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 CITED2Q99967 270 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-207ENST00000634712 RASL11BQ9BPW5 248 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 GHITMQ9H3K2 345 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 WNK1Q9H4A3 2382 aa12.47□□□□□ -0.41
LINC00339-207ENST00000634712 SERPINE3A8MV23 424 aa12.46□□□□□ -0.41
LINC00339-207ENST00000634712 ZNF736B4DX44 427 aaPredicted RBP12.46□□□□□ -0.41
LINC00339-207ENST00000634712 OR3A3P47888 321 aa12.46□□□□□ -0.41
LINC00339-207ENST00000634712 LSAMPQ13449 338 aa12.46□□□□□ -0.41
LINC00339-207ENST00000634712 KIR2DS1Q14954 304 aa12.46□□□□□ -0.41
LINC00339-207ENST00000634712 NDUFA11Q86Y39 141 aa12.46□□□□□ -0.41
LINC00339-207ENST00000634712 ODF3L1Q8IXM7 274 aa12.46□□□□□ -0.41
LINC00339-207ENST00000634712 OR4X2Q8NGF9 303 aa12.46□□□□□ -0.41
LINC00339-207ENST00000634712 PHF21AQ96BD5 680 aa12.46□□□□□ -0.41
LINC00339-207ENST00000634712 RNF167Q9H6Y7 350 aa12.46□□□□□ -0.41
LINC00339-207ENST00000634712 KCNK7Q9Y2U2 307 aa12.46□□□□□ -0.41
LINC00339-207ENST00000634712 SAA2-SAA4A0A096LPE2 208 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 ITGB1BP1O14713 200 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 SCGNO76038 276 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 OPN1MWP04001 364 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 CLEC2LP0C7M8 214 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 SAA2P0DJI9 122 aaPredicted RBP12.45□□□□□ -0.42
LINC00339-207ENST00000634712 OPN1MW2P0DN77 364 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 OPN1MW3P0DN78 364 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 SNRPBP14678 240 aaKnown RBP12.45□□□□□ -0.42
LINC00339-207ENST00000634712 CDNFQ49AH0 187 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 IDNKQ5T6J7 187 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 ZNF833PQ6ZTB9 187 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 SLC35E3Q7Z769 313 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 FOXRED2Q8IWF2 684 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 Q8N6K4 173 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 OR4A4PQ8NGN8 299 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms