RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 PGA4P0DJD7 388 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 PGA5P0DJD9 388 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 SHISA5Q8N114 240 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 CACNA1DQ01668 2161 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 BGLAPP02818 100 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 HOXD4P09016 255 aaPredicted RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 RAG2P55895 527 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 SYT8Q8NBV8 401 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 ZBTB34Q8NCN2 500 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 ZNF519Q8TB69 540 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 PHYHIPLQ96FC7 376 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 CEACAM18A8MTB9 384 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 B4E171 279 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 UPK3AO75631 287 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 TSPAN7P41732 249 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 PNRC1Q12796 327 aaPredicted RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 KLF9Q13886 244 aaPredicted RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 AMMECR1LQ6DCA0 310 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 STXBP6Q8NFX7 210 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 ADAT3Q96EY9 351 aaPredicted RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 TMEM191AQ9H0A3 160 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 XIRP1Q702N8 1843 aaKnown RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 DLK1P80370 383 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 LY6EQ16553 131 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 TMEM251Q8N6I4 163 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 HMSDA8MTL9 139 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 LRRC75BQ2VPJ9 315 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 C1orf174Q8IYL3 243 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 TEX29Q8N6K0 151 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 ADIPOR1Q96A54 375 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 PTX4Q96A99 478 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 ABHD14BQ96IU4 210 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 CHST5Q9GZS9 411 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 TMEM78Q5T7P6 136 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 FHL5Q5TD97 284 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 DDB2Q92466 427 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 CTDSPLO15194 276 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 TCTAP57738 103 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 MS4A3Q96HJ5 214 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 MARVELD1Q9BSK0 173 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 SLC25A33Q9BSK2 321 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 IL17BQ9UHF5 180 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 TRAV20A0A0B4J274 112 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 SMAD7O15105 426 aaKnown RBP10.22□□□□□ -0.77
SHPRH-211ENST00000629427 ATP5J2P56134 94 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 SNRPEP62304 92 aaKnown RBP10.22□□□□□ -0.77
SHPRH-211ENST00000629427 MUC15Q8N387 334 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 DCTN5Q9BTE1 182 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 RCC2Q9P258 522 aaKnown RBP10.22□□□□□ -0.77
SHPRH-211ENST00000629427 AKAP6Q13023 2319 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 A0A1W2PQF6 199 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 A0A1W2PS18 150 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 WNT9BO14905 357 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 IL11P20809 199 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 FAM214BQ7L5A3 538 aa10.22□□□□□ -0.77
SHPRH-211ENST00000629427 EWSR1Q01844 656 aaKnown RBP eCLIP10.22□□□□□ -0.77
SHPRH-211ENST00000629427 PRR33A8MZF0 331 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 IGHV4-34P06331 123 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 IER3P46695 156 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 SLC22A18ASQ8N1D0 253 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 MRPL24Q96A35 216 aaKnown RBP10.21□□□□□ -0.77
SHPRH-211ENST00000629427 GUCD1Q96NT3 240 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 TBX15Q96SF7 602 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 AURKAIP1Q9NWT8 199 aaPredicted RBP10.21□□□□□ -0.77
SHPRH-211ENST00000629427 ZDHHC8Q9ULC8 765 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 NEU3Q9UQ49 428 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 PARP14Q460N5 1801 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 TAS2R60P59551 318 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 SURF2Q15527 256 aaPredicted RBP10.21□□□□□ -0.77
SHPRH-211ENST00000629427 INTS1Q8N201 2190 aaKnown RBP10.21□□□□□ -0.77
SHPRH-211ENST00000629427 ANK1P16157 1881 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 TRAV8-7A0A075B6U6 113 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 HYPMO75409 117 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 ZNF324O75467 553 aaPredicted RBP10.21□□□□□ -0.77
SHPRH-211ENST00000629427 CTSSP25774 331 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 COL13A1Q5TAT6 717 aaPredicted RBP10.21□□□□□ -0.77
SHPRH-211ENST00000629427 HCP5Q6MZN7 132 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 OVCH2Q7RTZ1 564 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 CENPVQ7Z7K6 275 aaPredicted RBP10.21□□□□□ -0.77
SHPRH-211ENST00000629427 DTX4Q9Y2E6 619 aa10.21□□□□□ -0.77
SHPRH-211ENST00000629427 SMUG1Q53HV7 270 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 FAM53AQ6NSI3 398 aaPredicted RBP10.21□□□□□ -0.78
SHPRH-211ENST00000629427 CALHM1Q8IU99 346 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 ITLN1Q8WWA0 313 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 CYB5R1Q9UHQ9 305 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 PRR19A6NJB7 356 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 SNURFLB1AK76 121 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 HBZP02008 142 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 FAM74A3Q4VXF1 159 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 LAMTOR1Q6IAA8 161 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 GPA33Q99795 319 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 AP4M1O00189 453 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 PF4P02776 101 aa10.21□□□□□ -0.78
SHPRH-211ENST00000629427 ZNF501Q96CX3 271 aaPredicted RBP10.21□□□□□ -0.78
SHPRH-211ENST00000629427 A0A0J9YW62 118 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 RPL27AP46776 148 aaKnown RBP10.2□□□□□ -0.78
SHPRH-211ENST00000629427 RBM11P57052 281 aaKnown RBP10.2□□□□□ -0.78
SHPRH-211ENST00000629427 PSG4Q00888 419 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 HERPUD1Q15011 391 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 ZNF502Q8TBZ5 544 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms