RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 RAB9BQ9NP90 201 aa12.11□□□□□ -0.47
ATRX-217ENST00000624668 C8orf4Q9NR00 106 aa12.11□□□□□ -0.47
ATRX-217ENST00000624668 SCOCQ9UIL1 159 aa12.11□□□□□ -0.47
ATRX-217ENST00000624668 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
ATRX-217ENST00000624668 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
ATRX-217ENST00000624668 ATP6V0E1O15342 81 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 VSIG8P0DPA2 414 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 VDAC1P21796 283 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 HTR2CP28335 458 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 HTD2P86397 168 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 UNC119Q13432 240 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 HMGN3Q15651 99 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 NKAPLQ5M9Q1 402 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 OGFRL1Q5TC84 451 aaPredicted RBP12.1□□□□□ -0.47
ATRX-217ENST00000624668 ZNF833PQ6ZTB9 187 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 ZNF554Q86TJ5 538 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 OR5M8Q8NGP6 311 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 FAAP24Q9BTP7 215 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 IFI27L2Q9H2X8 130 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 GNB4Q9HAV0 340 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 WSB1Q9Y6I7 421 aa12.1□□□□□ -0.47
ATRX-217ENST00000624668 SAA2-SAA4A0A096LPE2 208 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 IGHV7-81A0A0B4J1V7 117 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 YPEL1O60688 119 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 SAA2P0DJI9 122 aaPredicted RBP12.09□□□□□ -0.47
ATRX-217ENST00000624668 RPS27AP62979 156 aaKnown RBP12.09□□□□□ -0.47
ATRX-217ENST00000624668 NDPQ00604 133 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 ACSM3Q53FZ2 586 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 C1orf100Q5SVJ3 147 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 C6orf201Q7Z4U5 140 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 YPEL2Q96QA6 119 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 NICN1Q9BSH3 213 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 ANKRD60Q9BZ19 345 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 PARP12Q9H0J9 701 aaKnown RBP12.09□□□□□ -0.47
ATRX-217ENST00000624668 OR51J1Q9H342 316 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 KCNIP1Q9NZI2 227 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 GHRLQ9UBU3 117 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 FBXO7Q9Y3I1 522 aa12.09□□□□□ -0.47
ATRX-217ENST00000624668 A0A0A6YYD4 124 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 SEC14L6B5MCN3 397 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 I3L521 148 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 CASQ2O14958 399 aaPredicted RBP12.08□□□□□ -0.48
ATRX-217ENST00000624668 NBR2O15453 112 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 IGLV1-40P01703 118 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 HLA-DRB1P01911 266 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 CD37P11049 281 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 SNRPBP14678 240 aaKnown RBP12.08□□□□□ -0.48
ATRX-217ENST00000624668 MAPK3P27361 379 aaPredicted RBP12.08□□□□□ -0.48
ATRX-217ENST00000624668 BLVRBP30043 206 aaPredicted RBP12.08□□□□□ -0.48
ATRX-217ENST00000624668 SVOPQ8N4V2 548 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 ZNF491Q8N8L2 437 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 OR11H1Q8NG94 326 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 CST11Q9H112 138 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 PARP11Q9NR21 331 aa12.08□□□□□ -0.48
ATRX-217ENST00000624668 LSM2Q9Y333 95 aaKnown RBP12.08□□□□□ -0.48
ATRX-217ENST00000624668 ST8SIA5O15466 376 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 RAMP3O60896 148 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 NDUFA3O95167 84 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 NAPSAO96009 420 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 GNB1P62873 340 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 QRFPP83859 136 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 GABPB1Q06547 395 aaPredicted RBP12.07□□□□□ -0.48
ATRX-217ENST00000624668 C5orf64Q2M2E5 130 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 C19orf54Q5BKX5 351 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 LY6G6FQ5SQ64 297 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 C9orf66Q5T8R8 295 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 ZNF880Q6PDB4 577 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 NPBQ8NG41 125 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 GALMQ96C23 342 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 OR5B12Q96R08 314 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 GFI1Q99684 422 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 TMED9Q9BVK6 235 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 TM2D1Q9BX74 207 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 ERGIC3Q9Y282 383 aa12.07□□□□□ -0.48
ATRX-217ENST00000624668 TRAV41A0A0B4J266 112 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 SLC22A1O15245 554 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 SOX15O60248 233 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 CDK1P06493 297 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 UBBP0CG47 229 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 OR5H8P0DN80 308 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 ECI1P42126 302 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 RUNX1Q01196 453 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 ZNF260Q3ZCT1 412 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 RPL39P5Q59GN2 51 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 RBM48Q5RL73 367 aaKnown RBP12.06□□□□□ -0.48
ATRX-217ENST00000624668 FAM131AQ6UXB0 335 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 MINDY2Q8NBR6 621 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 OR2AK2Q8NG84 335 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 IL1F10Q8WWZ1 152 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 PHYHIPQ92561 330 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 THRSPQ92748 146 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 UBE2E2Q96LR5 201 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 NEDD4LQ96PU5 975 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 HDHD3Q9BSH5 251 aaPredicted RBP12.06□□□□□ -0.48
ATRX-217ENST00000624668 TMEM59Q9BXS4 323 aa12.06□□□□□ -0.48
ATRX-217ENST00000624668 ZMAT5Q9UDW3 170 aaKnown RBP12.06□□□□□ -0.48
ATRX-217ENST00000624668 HUWE1Q7Z6Z7 4374 aaKnown RBP12.05□□□□□ -0.48
ATRX-217ENST00000624668 TMEM14DPA8MWL7 114 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms