RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 C20orf144Q9BQM9 153 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 ADMP35318 185 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 PSMG3Q9BT73 122 aaPredicted RBP12.98□□□□□ -0.33
PMS1-221ENST00000624204 IL36RNQ9UBH0 155 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 PPP1R3CQ9UQK1 317 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 TMEM250H0YL14 139 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 HS3ST1O14792 307 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 SLC35B1P78383 322 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 TMEM211Q6ICI0 200 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 SGMS2Q8NHU3 365 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 WNT5BQ9H1J7 359 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 ARF1P84077 181 aaKnown RBP12.97□□□□□ -0.33
PMS1-221ENST00000624204 LRRC75BQ2VPJ9 315 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 TPTE2P1Q5T6R2 138 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 WDYHV1Q96HA8 205 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 SLC35E1Q96K37 410 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 MRGPRX4Q96LA9 322 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 WDR61Q9GZS3 305 aaKnown RBP12.97□□□□□ -0.33
PMS1-221ENST00000624204 CA3P07451 260 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 LHFPL2Q6ZUX7 228 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 SYT13Q7L8C5 426 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 HAPLN4Q86UW8 402 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 BAGE3Q86Y29 109 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 BAGE2Q86Y30 109 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 TAF15Q92804 592 aaKnown RBP eCLIP12.97□□□□□ -0.33
PMS1-221ENST00000624204 PGLYRP1O75594 196 aaPredicted RBP12.97□□□□□ -0.33
PMS1-221ENST00000624204 TYMSP04818 313 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 S100GP29377 79 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 RBM11P57052 281 aaKnown RBP12.97□□□□□ -0.33
PMS1-221ENST00000624204 PLPPR5Q32ZL2 321 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 SAPCD1Q5SSQ6 148 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 FBXW9Q5XUX1 488 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 ABCA7Q8IZY2 2146 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 ZNF441Q8N8Z8 693 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 TXN2Q99757 166 aa12.97□□□□□ -0.33
PMS1-221ENST00000624204 LNP1A1A4G5 178 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 CLEC18AA5D8T8 446 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 CCL2P13500 99 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 CTSSP25774 331 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 MPLP40238 635 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
PMS1-221ENST00000624204 FBXO46Q6PJ61 603 aaPredicted RBP12.96□□□□□ -0.33
PMS1-221ENST00000624204 MCEMP1Q8IX19 187 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 CLEC18CQ8NCF0 446 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 CPEB3Q8NE35 698 aaKnown RBP12.96□□□□□ -0.33
PMS1-221ENST00000624204 ZNF296Q8WUU4 475 aaPredicted RBP12.96□□□□□ -0.33
PMS1-221ENST00000624204 RDH5Q92781 318 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 NEIL1Q96FI4 390 aaPredicted RBP12.96□□□□□ -0.33
PMS1-221ENST00000624204 GABRG3Q99928 467 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 FSCN3Q9NQT6 498 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 PXMP4Q9Y6I8 212 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 PCDH15Q96QU1 1955 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 SIRPB1O00241 398 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 SERF1AO75920 110 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 C1QTNF9P0C862 333 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 F2RP25116 425 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 RPL15P61313 204 aaKnown RBP12.96□□□□□ -0.33
PMS1-221ENST00000624204 KCNMB1Q16558 191 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 OR5D13Q8NGL4 314 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 LRRC61Q9BV99 259 aa12.96□□□□□ -0.33
PMS1-221ENST00000624204 SPTY2D1-AS1A0A0U1RR47 76 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 KIAA1324LA8MWY0 1029 aaPredicted RBP12.95□□□□□ -0.34
PMS1-221ENST00000624204 CBLN1P23435 193 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 LCN2P80188 198 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 SLC38A11Q08AI6 406 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 ACSM6Q6P461 480 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 TEX43Q6ZNM6 134 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 CENPVQ7Z7K6 275 aaPredicted RBP12.95□□□□□ -0.34
PMS1-221ENST00000624204 ZNF611Q8N823 705 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 OR5AU1Q8NGC0 362 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 OR10G9Q8NGN4 311 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 OR10G7Q8NGN6 311 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 UCN2Q96RP3 112 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 H0Y980 276 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 CLDN1O95832 211 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 CCL5P13501 91 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 COL8A2P25067 703 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 OR8B8Q15620 311 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 LEMD1Q68G75 181 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 PLSCR2Q9NRY7 297 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 C2orf16Q68DN1 1984 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 OR5G3P0C626 314 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 TNFRSF4P43489 277 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 ZNF468Q5VIY5 522 aaPredicted RBP12.95□□□□□ -0.34
PMS1-221ENST00000624204 STPG4Q8N801 248 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 OR10G3Q8NGC4 313 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 C10orf35Q96D05 121 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 DERL1Q9BUN8 251 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 ULBP2Q9BZM5 246 aa12.95□□□□□ -0.34
PMS1-221ENST00000624204 SERPINA7P05543 415 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 CRISP2P16562 243 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 BLKP51451 505 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 RBX1P62877 108 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 KIAA1644Q3SXP7 199 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 TRBV11-1A0A0K0K1C0 115 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 CCL25O15444 150 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 DHHO43323 396 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 WDR1O75083 606 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 MSMO1Q15800 293 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms