RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 MAP2K4P45985 399 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 DNAJB13P59910 316 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 CKS1BP61024 79 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 RPS23P62266 143 aaKnown RBP2.52□□□□□ -2.01
BRCA1-229ENST00000621897 TBPL1P62380 186 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 CACNG7P62955 275 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 CDK5Q00535 292 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 C16orf72Q14CZ0 275 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 PLPPR5Q32ZL2 321 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 AKR1C8PQ5T2L2 129 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 C1orf194Q5T5A4 169 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 C9orf64Q5T6V5 341 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 UNQ9370/PRO34162Q6UXP9 181 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 TEX43Q6ZNM6 134 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 OSR2Q8N2R0 312 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 SUMF2Q8NBJ7 301 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 ST6GALNAC3Q8NDV1 305 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 GPR26Q8NDV2 337 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 OR11H6Q8NGC7 330 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 OR10AD1Q8NGE0 317 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 OR9I1Q8NGQ6 314 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 DNAJC9Q8WXX5 260 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 TCEAL3Q969E4 200 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 FAM3DQ96BQ1 224 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 PDXPQ96GD0 296 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 SLC35G5Q96KT7 338 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 LINC00477Q96M19 166 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 OR2A7Q96R45 310 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 CCDC32Q9BV29 185 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 RSPO3Q9BXY4 272 aaPredicted RBP2.52□□□□□ -2.01
BRCA1-229ENST00000621897 HEBP1Q9NRV9 189 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 LYRM2Q9NU23 88 aaPredicted RBP2.52□□□□□ -2.01
BRCA1-229ENST00000621897 MRPL27Q9P0M9 148 aaKnown RBP2.52□□□□□ -2.01
BRCA1-229ENST00000621897 RSL24D1Q9UHA3 163 aaKnown RBP2.52□□□□□ -2.01
BRCA1-229ENST00000621897 ZNF780BQ9Y6R6 833 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 WDR97A6NE52 1622 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 BAZ2AQ9UIF9 1905 aaKnown RBP2.52□□□□□ -2.01
BRCA1-229ENST00000621897 WRNQ14191 1432 aaPredicted RBP eCLIP2.51□□□□□ -2.01
BRCA1-229ENST00000621897 NPATQ14207 1427 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 PPIP5K1Q6PFW1 1433 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 SIGLEC1Q9BZZ2 1709 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 IGKV2D-24A0A075B6R9 120 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 TRBV6-6A0A0A6YYG2 114 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 hADV38S2A0JD32 116 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 C9orf170A2RU37 121 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 MYBPHLA2RUH7 354 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 PGPA6NDG6 321 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 TMX2-CTNND1H3BSU7 103 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 TXNDC9O14530 226 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 PSPHP1O15172 72 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 HMGB3O15347 200 aaKnown RBP2.51□□□□□ -2.01
BRCA1-229ENST00000621897 TPST1O60507 370 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 SPAG7O75391 227 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 CDRT1O95170 752 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 CCNE2O96020 404 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 OR4A8P0C604 315 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 SERPINB10P48595 397 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 PSMB2P49721 201 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 TPI1P60174 286 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 SELENOTP62341 195 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 RPS24P62847 133 aaKnown RBP2.51□□□□□ -2.01
BRCA1-229ENST00000621897 RPS21P63220 83 aaKnown RBP2.51□□□□□ -2.01
BRCA1-229ENST00000621897 LAMTOR4Q0VGL1 99 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 C1DQ13901 141 aaKnown RBP2.51□□□□□ -2.01
BRCA1-229ENST00000621897 FZD2Q14332 565 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 PAFAH1B3Q15102 231 aaKnown RBP2.51□□□□□ -2.01
BRCA1-229ENST00000621897 C1orf100Q5SVJ3 147 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 HENMT1Q5T8I9 393 aaKnown RBP2.51□□□□□ -2.01
BRCA1-229ENST00000621897 SPATA31B1PQ5VZV4 182 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 ZFAND6Q6FIF0 208 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 ZNF620Q6ZNG0 422 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 GOLT1AQ6ZVE7 132 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 UMODL1-AS1Q8N2C9 162 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 DEFB125Q8N687 156 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 OR4D11Q8NGI4 311 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 OR10G4Q8NGN3 311 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 OR9Q1Q8NGQ5 310 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 LRRC29Q8WV35 223 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 CNBD2Q96M20 576 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 FOPNLQ96NB1 174 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 OR4K3Q96R72 315 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 HSPB9Q9BQS6 159 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 VPS25Q9BRG1 176 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 EFCAB11Q9BUY7 163 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 GGACTQ9BVM4 153 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 HES4Q9HCC6 221 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 MMP26Q9NRE1 261 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 TMEM100Q9NV29 134 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 COPZ2Q9P299 210 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 CLCF1Q9UBD9 225 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 ZNF629Q9UEG4 869 aaPredicted RBP2.51□□□□□ -2.01
BRCA1-229ENST00000621897 PCYOX1Q9UHG3 505 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 PRNDQ9UKY0 176 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 DYSFO75923 2080 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 DOCK3Q8IZD9 2030 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 VPS8Q8N3P4 1428 aa2.51□□□□□ -2.01
BRCA1-229ENST00000621897 TONSLQ96HA7 1378 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 KIF15Q9NS87 1388 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 IGSF9BQ9UPX0 1349 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms