RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 NAPSAO96009 420 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 CPEP16870 476 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 OR3A3P47888 321 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 MLLT11Q13015 90 aaPredicted RBP13.5□□□□□ -0.25
HMGN3-203ENST00000620514 IZUMO2Q6UXV1 221 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 LCNL1Q6ZST4 164 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 C8orf86Q6ZUL3 223 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 PRSS48Q7RTY5 328 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 SVOPQ8N4V2 548 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 FAM71E2Q8N5Q1 922 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 SETD6Q8TBK2 473 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 GALMQ96C23 342 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 YPEL2Q96QA6 119 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 PLGRKTQ9HBL7 147 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 CHMP1AQ9HD42 196 aaPredicted RBP13.5□□□□□ -0.25
HMGN3-203ENST00000620514 ERICH4A6NGS2 130 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 NUDT19A8MXV4 375 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 SLC17A2O00624 439 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 THBS3P49746 956 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 CLDN12P56749 244 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 FABP5Q01469 135 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 ZNF880Q6PDB4 577 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 MRPL41Q8IXM3 137 aaKnown RBP13.49□□□□□ -0.25
HMGN3-203ENST00000620514 KLHL30-AS1Q8NEE0 82 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 OR8H1Q8NGG4 311 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 IL1F10Q8WWZ1 152 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 RCC1LQ96I51 464 aaKnown RBP13.49□□□□□ -0.25
HMGN3-203ENST00000620514 RITA1Q96K30 269 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 CNBD2Q96M20 576 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 MGLLQ99685 303 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 NABP2Q9BQ15 211 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 HDHD3Q9BSH5 251 aaPredicted RBP13.49□□□□□ -0.25
HMGN3-203ENST00000620514 ZFP57Q9NU63 452 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 PLEKHJ1Q9NW61 149 aa13.49□□□□□ -0.25
HMGN3-203ENST00000620514 SAA2-SAA4A0A096LPE2 208 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 RGS11O94810 467 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 RPLP1P05386 114 aaKnown RBP13.48□□□□□ -0.25
HMGN3-203ENST00000620514 SAA2P0DJI9 122 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-203ENST00000620514 SLC2A2P11168 524 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-203ENST00000620514 ARSBP15848 533 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 CNTFRP26992 372 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 CALRP27797 417 aaKnown RBP13.48□□□□□ -0.25
HMGN3-203ENST00000620514 TRAM1Q15629 374 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 PNLIPRP3Q17RR3 467 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 LY6G6FQ5SQ64 297 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 ZNF833PQ6ZTB9 187 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 COMMD1Q8N668 190 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 OR51D1Q8NGF3 324 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 DUX3Q96PT4 197 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 PARP12Q9H0J9 701 aaKnown RBP13.48□□□□□ -0.25
HMGN3-203ENST00000620514 IFI27L2Q9H2X8 130 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 VCX3BQ9H321 246 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 ABRACLQ9P1F3 81 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 AK3Q9UIJ7 227 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 LRRC42Q9Y546 428 aa13.48□□□□□ -0.25
HMGN3-203ENST00000620514 FOXI3A8MTJ6 420 aaPredicted RBP13.47□□□□□ -0.25
HMGN3-203ENST00000620514 ST8SIA5O15466 376 aa13.47□□□□□ -0.25
HMGN3-203ENST00000620514 ARL6IP5O75915 188 aa13.47□□□□□ -0.25
HMGN3-203ENST00000620514 PSMA1P25786 263 aaKnown RBP13.47□□□□□ -0.25
HMGN3-203ENST00000620514 SOX6P35712 828 aa13.47□□□□□ -0.25
HMGN3-203ENST00000620514 KRTAP10-11P60412 298 aa13.47□□□□□ -0.25
HMGN3-203ENST00000620514 MMDQ15546 238 aa13.47□□□□□ -0.25
HMGN3-203ENST00000620514 RAB11BQ15907 218 aa13.47□□□□□ -0.25
HMGN3-203ENST00000620514 TEX38Q6PEX7 206 aa13.47□□□□□ -0.25
HMGN3-203ENST00000620514 FAM89BQ8N5H3 189 aa13.47□□□□□ -0.25
HMGN3-203ENST00000620514 OR2AK2Q8NG84 335 aa13.47□□□□□ -0.25
HMGN3-203ENST00000620514 URM1Q9BTM9 101 aaKnown RBP13.47□□□□□ -0.25
HMGN3-203ENST00000620514 HOXD3P31249 432 aaPredicted RBP13.46□□□□□ -0.25
HMGN3-203ENST00000620514 VEGFCP49767 419 aa13.46□□□□□ -0.25
HMGN3-203ENST00000620514 TMEM50BP56557 158 aa13.46□□□□□ -0.25
HMGN3-203ENST00000620514 ACTBP60709 375 aa13.46□□□□□ -0.25
HMGN3-203ENST00000620514 CFHR3Q02985 330 aa13.46□□□□□ -0.25
HMGN3-203ENST00000620514 PLA2G7Q13093 441 aa13.46□□□□□ -0.25
HMGN3-203ENST00000620514 SSX1Q16384 188 aa13.46□□□□□ -0.25
HMGN3-203ENST00000620514 ZNF695Q8IW36 515 aa13.46□□□□□ -0.25
HMGN3-203ENST00000620514 P2RX4Q99571 388 aa13.46□□□□□ -0.25
HMGN3-203ENST00000620514 ZNF251Q9BRH9 671 aa13.46□□□□□ -0.25
HMGN3-203ENST00000620514 STEAP1Q9UHE8 339 aa13.46□□□□□ -0.25
HMGN3-203ENST00000620514 ZNF107Q9UII5 783 aaPredicted RBP13.46□□□□□ -0.25
HMGN3-203ENST00000620514 TRBV6-6A0A0A6YYG2 114 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 RRP9O43818 475 aaKnown RBP13.45□□□□□ -0.26
HMGN3-203ENST00000620514 MYCNOSP40205 109 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 HSPA13P48723 471 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 TBCEQ15813 527 aaPredicted RBP13.45□□□□□ -0.26
HMGN3-203ENST00000620514 C2orf76Q3KRA6 126 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 RPL39P5Q59GN2 51 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 HES5Q5TA89 166 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 MOB1BQ7L9L4 216 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 FAM3DQ96BQ1 224 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 RAX2Q96IS3 184 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 ARHGAP5-AS1Q96IT6 56 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 PECRQ9BY49 303 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 OR1A1Q9P1Q5 309 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 V9GY05 133 aa13.45□□□□□ -0.26
HMGN3-203ENST00000620514 SHISA3A0PJX4 238 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 K7EIL1 84 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 DUS4LO95620 317 aaKnown RBP13.44□□□□□ -0.26
HMGN3-203ENST00000620514 SLC6A1P30531 599 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 HLA-DRB3P79483 266 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 FOXE3Q13461 319 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms