RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ACTL10Q5JWF8 245 aa8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 LDLRAD2Q5SZI1 272 aa8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 C9orf40Q8IXQ3 194 aa8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 KIR2DL5AQ8N109 375 aa8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 CLEC18CQ8NCF0 446 aa8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 OR5D13Q8NGL4 314 aa8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 RDH5Q92781 318 aa8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 ANAPC16Q96DE5 110 aa8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 NEIL1Q96FI4 390 aaPredicted RBP8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 MMP17Q9ULZ9 603 aa8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 RPH3ALQ9UNE2 315 aa8.4□□□□□ -1.06
TNFAIP3-210ENST00000620204 HS3ST1O14792 307 aa8.4□□□□□ -1.07
TNFAIP3-210ENST00000620204 IL6RP08887 468 aaPredicted RBP8.4□□□□□ -1.07
TNFAIP3-210ENST00000620204 PSG2P11465 335 aa8.4□□□□□ -1.07
TNFAIP3-210ENST00000620204 GRB2P62993 217 aaKnown RBP8.4□□□□□ -1.07
TNFAIP3-210ENST00000620204 SMIM15Q7Z3B0 74 aa8.4□□□□□ -1.07
TNFAIP3-210ENST00000620204 GJC3Q8NFK1 279 aa8.4□□□□□ -1.07
TNFAIP3-210ENST00000620204 PLPPR1Q8TBJ4 325 aa8.4□□□□□ -1.07
TNFAIP3-210ENST00000620204 PP6455Q8WZ26 134 aa8.4□□□□□ -1.07
TNFAIP3-210ENST00000620204 ANAPC10Q9UM13 185 aa8.4□□□□□ -1.07
TNFAIP3-210ENST00000620204 NUP210LQ5VU65 1888 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 SYNGR2O43760 224 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 SLC38A11Q08AI6 406 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 LPAL2Q16609 132 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 PRAMEF20Q5VT98 475 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 FAM58AQ8N1B3 248 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 LMX1AQ8TE12 382 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 GPR146Q96CH1 333 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 LYZL4Q96KX0 146 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 ABCA1O95477 2261 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 KIAA1549LQ6ZVL6 1849 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 A0A1W2PPV4 95 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 F6UZH7 168 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 SH2D1BO14796 132 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 GDF9O60383 454 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 TCL1AP56279 114 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 SNAI3Q3KNW1 292 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 SPTSSAQ969W0 71 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 KLHDC7BQ96G42 594 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 P2RX4Q99571 388 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 DERL1Q9BUN8 251 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 SERTAD4Q9NUC0 356 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 BET1LQ9NYM9 111 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 RP1L1Q8IWN7 2480 aaPredicted RBP8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGKV1D-13A0A0B4J2D9 117 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGHV3-64DA0A0J9YX35 117 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 SLC17A3O00476 420 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 NPIPB7O75200 414 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 TUSC2O75896 110 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 NRASP01111 189 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 CRYABP02511 175 aaKnown RBP8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGKV1-13P0DP09 117 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 ARL16Q0P5N6 197 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 FAM19A2Q8N3H0 131 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 RPP25LQ8N5L8 163 aaKnown RBP8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 FAM131CQ96AQ9 280 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 GAL3ST2Q9H3Q3 398 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 NAT8BQ9UHF3 227 aa8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 MRPS17Q9Y2R5 130 aaKnown RBP8.39□□□□□ -1.07
TNFAIP3-210ENST00000620204 SNURFLB1AK76 121 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 G3V3Y1 287 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 SRFP11831 508 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 RBX1P62877 108 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 WDYHV1Q96HA8 205 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 OR6C1Q96RD1 312 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 GPR35Q9HC97 309 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 A0A0G2JRQ6 117 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 LOC102725191A0A1B0GVB3 256 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 F2Z2F3 143 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 NAPSAO96009 420 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 KLF3P57682 345 aaPredicted RBP8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 ID3Q02535 119 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 C17orf67Q0P5P2 114 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 COA6Q5JTJ3 125 aaKnown RBP8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 LYG1Q8N1E2 194 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 ST6GALNAC6Q969X2 333 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 BORCS7Q96B45 105 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 ALKBH3Q96Q83 286 aaPredicted RBP8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 VPS13AQ96RL7 3174 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 ICE1Q9Y2F5 2266 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 C3orf80F5H4A9 247 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 NPIPA3F8WFD2 350 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 H0Y8G0 127 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 PDCD6O75340 191 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 MYF5P13349 255 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 CNN3Q15417 329 aaKnown RBP8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 FBXW9Q5XUX1 488 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF439Q8NDP4 499 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 PINX1Q96BK5 328 aaKnown RBP8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 RAB40CQ96S21 281 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 RASL10BQ96S79 203 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 GABRG3Q99928 467 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 MRPL18Q9H0U6 180 aaKnown RBP8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 CLDN16Q9Y5I7 305 aa8.38□□□□□ -1.07
TNFAIP3-210ENST00000620204 LIPT2A6NK58 231 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF253O75346 499 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 NXPH2O95156 264 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 KRASP01116 189 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 MSR1P21757 451 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 NPBWR2P48146 333 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms