RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 TRBV24-1A0A075B6N3 115 aa17.27■□□□□ 0.36
NEK3-208ENST00000618534 UBE2L5PA0A1B0GUS4 154 aa17.27■□□□□ 0.36
NEK3-208ENST00000618534 OR5B21A6NL26 309 aa17.27■□□□□ 0.36
NEK3-208ENST00000618534 CA6P23280 308 aa17.27■□□□□ 0.36
NEK3-208ENST00000618534 GAMTQ14353 236 aa17.27■□□□□ 0.36
NEK3-208ENST00000618534 Q6P435 159 aa17.27■□□□□ 0.36
NEK3-208ENST00000618534 RHOVQ96L33 236 aa17.27■□□□□ 0.36
NEK3-208ENST00000618534 HES7Q9BYE0 225 aa17.27■□□□□ 0.36
NEK3-208ENST00000618534 MPC1Q9Y5U8 109 aa17.27■□□□□ 0.36
NEK3-208ENST00000618534 LRP5LA4QPB2 252 aa17.27■□□□□ 0.35
NEK3-208ENST00000618534 OPN1MWP04001 364 aa17.27■□□□□ 0.35
NEK3-208ENST00000618534 OPN1MW2P0DN77 364 aa17.27■□□□□ 0.35
NEK3-208ENST00000618534 OPN1MW3P0DN78 364 aa17.27■□□□□ 0.35
NEK3-208ENST00000618534 WDR25Q64LD2 544 aaPredicted RBP17.27■□□□□ 0.35
NEK3-208ENST00000618534 S100PBPQ96BU1 408 aa17.27■□□□□ 0.35
NEK3-208ENST00000618534 TMEM9BQ9NQ34 198 aa17.27■□□□□ 0.35
NEK3-208ENST00000618534 A0A1W2PR80 420 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 SIRPB1O00241 398 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 WDR1O75083 606 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 SYNGR4O95473 234 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 ARR3P36575 388 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 DUSP3P51452 185 aaPredicted RBP17.26■□□□□ 0.35
NEK3-208ENST00000618534 HNF4GQ14541 408 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 ACSF3Q4G176 576 aaPredicted RBP17.26■□□□□ 0.35
NEK3-208ENST00000618534 ZNF600Q6ZNG1 722 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 TIPARPQ7Z3E1 657 aaKnown RBP17.26■□□□□ 0.35
NEK3-208ENST00000618534 OR2M7Q8NG81 312 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 APH1AQ96BI3 265 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 OR51I2Q9H344 312 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 LIN7CQ9NUP9 197 aaKnown RBP17.26■□□□□ 0.35
NEK3-208ENST00000618534 FAM166BA8MTA8 275 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 TGOLN2O43493 480 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 CD55P08174 381 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 TLE1Q04724 770 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 PLP2Q04941 152 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 CLN3Q13286 438 aa17.26■□□□□ 0.35
NEK3-208ENST00000618534 TAF15Q92804 592 aaKnown RBP eCLIP17.26■□□□□ 0.35
NEK3-208ENST00000618534 ZNF737O75373 536 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 IFNA1P01562 189 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 IGKV1D-33P01593 117 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 IGKV1-33P01594 117 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 SPATA46Q5T0L3 261 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 THOC3Q96J01 351 aaKnown RBP17.25■□□□□ 0.35
NEK3-208ENST00000618534 PKIBQ9C010 78 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 CDH20Q9HBT6 801 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 TRAPPC2LQ9UL33 140 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 MED12LQ86YW9 2145 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 DOCK7Q96N67 2140 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 CD81P60033 236 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 SLC38A11Q08AI6 406 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 ADIRFQ15847 76 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 OR8G2PQ6IF36 304 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 LHX4Q969G2 390 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 PINX1Q96BK5 328 aaKnown RBP17.25■□□□□ 0.35
NEK3-208ENST00000618534 PACRGQ96M98 296 aaPredicted RBP17.25■□□□□ 0.35
NEK3-208ENST00000618534 SMIM7Q9BQ49 75 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 CTDSP1Q9GZU7 261 aa17.25■□□□□ 0.35
NEK3-208ENST00000618534 KIAA2026Q5HYC2 2103 aa17.24■□□□□ 0.35
NEK3-208ENST00000618534 NEURL1O76050 574 aa17.24■□□□□ 0.35
NEK3-208ENST00000618534 SSPNQ14714 243 aa17.24■□□□□ 0.35
NEK3-208ENST00000618534 DCAF12Q5T6F0 453 aa17.24■□□□□ 0.35
NEK3-208ENST00000618534 RPP25LQ8N5L8 163 aaKnown RBP17.24■□□□□ 0.35
NEK3-208ENST00000618534 HIST1H2BLQ99880 126 aa17.24■□□□□ 0.35
NEK3-208ENST00000618534 FAM173AQ9BQD7 235 aa17.24■□□□□ 0.35
NEK3-208ENST00000618534 RYDENQ9NUL5 291 aaKnown RBP17.24■□□□□ 0.35
NEK3-208ENST00000618534 J3QT63 122 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 NCR3LG1Q68D85 454 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 ZNF497Q6ZNH5 498 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 MOB1BQ7L9L4 216 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 NUFIP2Q7Z417 695 aaKnown RBP17.23■□□□□ 0.35
NEK3-208ENST00000618534 DRAM1Q8N682 238 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 PARD6GQ9BYG4 376 aaPredicted RBP17.23■□□□□ 0.35
NEK3-208ENST00000618534 SLC39A9Q9NUM3 307 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 HMGB3O15347 200 aaKnown RBP17.23■□□□□ 0.35
NEK3-208ENST00000618534 OR2H2O95918 312 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 APLNRP35414 380 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 MAGEA5P43359 124 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 C3AR1Q16581 482 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 C16orf82Q7Z2V1 217 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 OR10A7Q8NGE5 316 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 OR4X1Q8NH49 305 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 C14orf144Q96I85 54 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 NAT8Q9UHE5 227 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 KMT2EQ8IZD2 1858 aa17.23■□□□□ 0.35
NEK3-208ENST00000618534 MEF2BQ02080 365 aaPredicted RBP17.22■□□□□ 0.35
NEK3-208ENST00000618534 C6orf15Q6UXA7 325 aaPredicted RBP17.22■□□□□ 0.35
NEK3-208ENST00000618534 WDR86Q86TI4 376 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 NECAP1Q8NC96 275 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 STRADBQ9C0K7 418 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 B4E171 279 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 CLDN1O95832 211 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 CEACAM6P40199 344 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 TSPAN7P41732 249 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 CYP2G1PQ6ZSU1 146 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 FGFRL1Q8N441 504 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 B4GALT7Q9UBV7 327 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 PITPNC1Q9UKF7 332 aa17.22■□□□□ 0.35
NEK3-208ENST00000618534 MT-CO3P00414 261 aa17.21■□□□□ 0.35
NEK3-208ENST00000618534 ZXDAP98168 799 aa17.21■□□□□ 0.35
NEK3-208ENST00000618534 DNLZQ5SXM8 178 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms