RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 KCNIP4Q6PIL6 250 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 SLC23A3Q6PIS1 610 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 SMRP1Q8NCR6 262 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 NFAM1Q8NET5 270 aaPredicted RBP11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 RNASE8Q8TDE3 154 aaKnown RBP11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 PP6455Q8WZ26 134 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 RYDENQ9NUL5 291 aaKnown RBP11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 PSENENQ9NZ42 101 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 OR6C3Q9NZP0 311 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 ZFHX4Q86UP3 3567 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 C1QTNF9BB2RNN3 333 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 IL24Q13007 206 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 OSR2Q8N2R0 312 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 OR2V1Q8NHB1 315 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 RDH5Q92781 318 aa11.48□□□□□ -0.57
PCDHA11-202ENST00000616325 TMEM210A6NLX4 147 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 CXCL13O43927 109 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 VDAC1P21796 283 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 PTGDSP41222 190 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 TM2D1Q9BX74 207 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 LRP4O75096 1905 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 LILRA1O75019 489 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 RBMXL2O75526 392 aaKnown RBP11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 CFIP05156 583 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 CDKN1AP38936 164 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 HLA-BQ31612 363 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 CRIP3Q6Q6R5 217 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 WDR5BQ86VZ2 330 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 ODF3L1Q8IXM7 274 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 ZDHHC23Q8IYP9 409 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 LRTM2Q8N967 370 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 OR8G5Q8NG78 346 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 OR10V1Q8NGI7 309 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 PLPPR1Q8TBJ4 325 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 ZNF488Q96MN9 340 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 CACNG5Q9UF02 275 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 A0A0J9YW62 118 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 CD300LBA8K4G0 201 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 ARL16Q0P5N6 197 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 CEACAM16Q2WEN9 425 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 ZNF611Q8N823 705 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 FGFBP3Q8TAT2 258 aa11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 ZCCHC14Q8WYQ9 949 aaKnown RBP11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 MRPS18CQ9Y3D5 142 aaKnown RBP11.47□□□□□ -0.57
PCDHA11-202ENST00000616325 A0A0G2JRQ6 117 aa11.46□□□□□ -0.57
PCDHA11-202ENST00000616325 FOXI3A8MTJ6 420 aaPredicted RBP11.46□□□□□ -0.57
PCDHA11-202ENST00000616325 TCN2P20062 427 aa11.46□□□□□ -0.57
PCDHA11-202ENST00000616325 TGFBR3Q03167 851 aa11.46□□□□□ -0.57
PCDHA11-202ENST00000616325 OR4C12Q96R67 309 aa11.46□□□□□ -0.57
PCDHA11-202ENST00000616325 ANGPTL4Q9BY76 406 aa11.46□□□□□ -0.57
PCDHA11-202ENST00000616325 SRXN1Q9BYN0 137 aa11.46□□□□□ -0.57
PCDHA11-202ENST00000616325 TMEM9BQ9NQ34 198 aa11.46□□□□□ -0.57
PCDHA11-202ENST00000616325 ERRFI1Q9UJM3 462 aaPredicted RBP11.46□□□□□ -0.57
PCDHA11-202ENST00000616325 ROS1P08922 2347 aa11.46□□□□□ -0.57
PCDHA11-202ENST00000616325 IL3RAP26951 378 aa11.46□□□□□ -0.58
PCDHA11-202ENST00000616325 THBS3P49746 956 aa11.46□□□□□ -0.58
PCDHA11-202ENST00000616325 GPM6AP51674 278 aa11.46□□□□□ -0.58
PCDHA11-202ENST00000616325 SRPXP78539 464 aa11.46□□□□□ -0.58
PCDHA11-202ENST00000616325 COL5A1-AS1Q5SY13 56 aa11.46□□□□□ -0.58
PCDHA11-202ENST00000616325 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.58
PCDHA11-202ENST00000616325 MIEN1Q9BRT3 115 aa11.46□□□□□ -0.58
PCDHA11-202ENST00000616325 GPR27Q9NS67 375 aa11.46□□□□□ -0.58
PCDHA11-202ENST00000616325 KBTBD11O94819 623 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 CLDN1O95832 211 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 OTX2P32243 289 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 SUMO3P55854 103 aaPredicted RBP11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 BAXQ07812 192 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 AAED1Q7RTV5 226 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 ATOH7Q8N100 152 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 SGMS2Q8NHU3 365 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 PPP1R3CQ9UQK1 317 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 TPRP12270 2363 aaKnown RBP11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 A0A1W2PQM1 296 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 SERPINA7P05543 415 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 PAX9P55771 341 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 EIF3IQ13347 325 aaKnown RBP11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 ABLIM2Q6H8Q1 611 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 CYP2G1PQ6ZSU1 146 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 OR1L6Q8NGR2 347 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 ABHD3Q8WU67 409 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 GPR146Q96CH1 333 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 CPAMD8Q8IZJ3 1885 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 A0A0G2JMM0 328 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 A0A1W2PPB8 328 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 A0A1W2PRS3 328 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 KIR3DP1A8MWS1 328 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 LINC00614P0C842 121 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 PSG2P11465 335 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 ZXDAP98168 799 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 ID3Q02535 119 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 CNN3Q15417 329 aaKnown RBP11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 TMEM183BQ1AE95 376 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 CPEB3Q8NE35 698 aaKnown RBP11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 OIT3Q8WWZ8 545 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 KCNS2Q9ULS6 477 aa11.45□□□□□ -0.58
PCDHA11-202ENST00000616325 CBLN1P23435 193 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 DTYMKP23919 212 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms