RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 MKRN2OSH3BPM6 223 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 DFFBO76075 338 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 DEFA4P12838 97 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 COL8A2P25067 703 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 RPL23P62829 140 aaKnown RBP6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 HOXA4Q00056 320 aaPredicted RBP6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 DEFA6Q01524 100 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 TMEM14EPQ6UXP3 125 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 TMEM183AQ8IXX5 376 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 OR5R1Q8NH85 324 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 RDH5Q92781 318 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 P2RX4Q99571 388 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 DUSP23Q9BVJ7 150 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 STRADBQ9C0K7 418 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 SMG1Q96Q15 3661 aaKnown RBP6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 CNTRLQ7Z7A1 2325 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 KIR2DS1A0A191URI9 304 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 KIR2DS4P43632 304 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 LHX2P50458 406 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 PCBD1P61457 104 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 PKIAP61925 76 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 NKX6-1P78426 367 aaPredicted RBP6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 KIR2DS1Q14954 304 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 SSX2Q16385 188 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 C16orf82Q7Z2V1 217 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 C1orf87Q8N0U7 546 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 UBALD1Q8TB05 177 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 IFI44Q8TCB0 444 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 GP6Q9HCN6 339 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 VAX2Q9UIW0 290 aa6.28□□□□□ -1.4
PPARGC1A-217ENST00000613098 RAMP3O60896 148 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 SNRPCP09234 159 aaKnown RBP6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 CTXN2P0C2S0 81 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 GNB2P62879 340 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 TMEM41BQ5BJD5 291 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 MRGPRGQ86SM5 289 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 TUSC5Q8IXB3 177 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 OR10V1Q8NGI7 309 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 OR5A2Q8NGI9 324 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 OR51I2Q9H344 312 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 GFOD1Q9NXC2 390 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 PSENENQ9NZ42 101 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 C1QTNF9BB2RNN3 333 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 CCNOP22674 350 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 CLDN18P56856 261 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 ERVK11-1P61568 191 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 SERF2P84101 59 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 ZXDAP98168 799 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 CYP2G1PQ6ZSU1 146 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 STX12Q86Y82 276 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 TAF15Q92804 592 aaKnown RBP eCLIP6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 SGCZQ96LD1 299 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 LINC00470Q9BZP3 86 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 PLA2G3Q9NZ20 509 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 PITPNC1Q9UKF7 332 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 MRPS18CQ9Y3D5 142 aaKnown RBP6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 PI4KAP42356 2102 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 A0A087X0M5 115 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 A0A1B0GX30 115 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 CD300LBA8K4G0 201 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 HMGB3O15347 200 aaKnown RBP6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 ZNF737O75373 536 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 OPN1MWP04001 364 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 OPN1MW2P0DN77 364 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 OPN1MW3P0DN78 364 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 RPL30P62888 115 aaKnown RBP6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 TRIP6Q15654 476 aaKnown RBP6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 SPINK14Q6IE38 97 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 OR10A7Q8NGE5 316 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 OR1L1Q8NH94 360 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 OR10J5Q8NHC4 309 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 ACTR3CQ9C0K3 210 aaPredicted RBP6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 UFSP2Q9NUQ7 469 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 PILRBQ9UKJ0 227 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 PPP1R3CQ9UQK1 317 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 ARHGAP21Q5T5U3 1957 aa6.27□□□□□ -1.41
PPARGC1A-217ENST00000613098 MAP1LC3B2A6NCE7 125 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 CEBPZOSA8MTT3 80 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 DVL1O14640 695 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 NUPR1O60356 82 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 LINC00205P59089 165 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 HNF4GQ14541 408 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 ESPL1Q14674 2120 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 ZNF497Q6ZNH5 498 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 TIPARPQ7Z3E1 657 aaKnown RBP6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 FGFRL1Q8N441 504 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 DRAM1Q8N682 238 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 HIST1H2AAQ96QV6 131 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 HES7Q9BYE0 225 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 MAP1LC3BQ9GZQ8 125 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 CTDSP1Q9GZU7 261 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 MBNL3Q9NUK0 354 aaKnown RBP6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 TRAPPC2LH3BP13 241 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 NEURL1O76050 574 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 KBTBD11O94819 623 aa6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 CNOT4O95628 575 aaKnown RBP6.26□□□□□ -1.41
PPARGC1A-217ENST00000613098 IFNA5P01569 189 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms