RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 CLN8Q9UBY8 286 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 MGAQ8IWI9 3026 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 CXorf65A6NEN9 183 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 H0Y980 276 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 RAMP3O60896 148 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 NEURL1O76050 574 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 IGKV1-5P01602 117 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 G6PCP35575 357 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 CABLES2Q9BTV7 478 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 OR2J1Q9GZK6 312 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 NTN3O00634 580 aaPredicted RBP11.92□□□□□ -0.5
COL6A1-207ENST00000612273 LHX2P50458 406 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 ZNF324BQ6AW86 544 aaPredicted RBP11.92□□□□□ -0.5
COL6A1-207ENST00000612273 FIP1L1Q6UN15 594 aaKnown RBP11.92□□□□□ -0.5
COL6A1-207ENST00000612273 SPSB4Q96A44 273 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 WFIKKN1Q96NZ8 548 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 FOXJ2Q9P0K8 574 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 WNT9BO14905 357 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
COL6A1-207ENST00000612273 SERPINA7P05543 415 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 HOXA5P20719 270 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 IL24Q13007 206 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 HAPLN4Q86UW8 402 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 TMEM251Q8N6I4 163 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 OR5D13Q8NGL4 314 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 TTTY12Q9BZ98 90 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 SLC39A9Q9NUM3 307 aa11.92□□□□□ -0.5
COL6A1-207ENST00000612273 CLEC18AA5D8T8 446 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 DNPH1O43598 174 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 LMO1P25800 156 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 CLDN18P56856 261 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 GNG3P63215 75 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 ZNF506Q5JVG8 444 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 COLCA1Q6ZS62 124 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 MDP1Q86V88 176 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 CLEC18CQ8NCF0 446 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 ABHD5Q8WTS1 349 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 POM121L2Q96KW2 1035 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 IL17BQ9UHF5 180 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 RIF1Q5UIP0 2472 aaKnown RBP11.91□□□□□ -0.5
COL6A1-207ENST00000612273 MAP1LC3B2A6NCE7 125 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 LYZL6O75951 148 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 OR2H2O95918 312 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 HSPB1P04792 205 aaKnown RBP11.91□□□□□ -0.5
COL6A1-207ENST00000612273 COL8A2P25067 703 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 PMELP40967 661 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 CDX1P47902 265 aaPredicted RBP11.91□□□□□ -0.5
COL6A1-207ENST00000612273 DUSP3P51452 185 aaPredicted RBP11.91□□□□□ -0.5
COL6A1-207ENST00000612273 KHDC3LQ587J8 217 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 OR5P3Q8WZ94 311 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 SMIM7Q9BQ49 75 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 MAP1LC3BQ9GZQ8 125 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 ZNF703Q9H7S9 590 aaPredicted RBP11.91□□□□□ -0.5
COL6A1-207ENST00000612273 DMXL2Q8TDJ6 3036 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 DFFBO76075 338 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 IGHV2-70P01814 119 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 SSX9Q7RTT3 188 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 OR5A2Q8NGI9 324 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 TINAGQ9UJW2 476 aa11.91□□□□□ -0.5
COL6A1-207ENST00000612273 LOC102723971A0A1B0GUV8 181 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 HBE1P02100 147 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 BCL2P10415 239 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 OR3A1P47881 315 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 GLIPR1P48060 266 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 BAXQ07812 192 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 GAMTQ14353 236 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 KRTAP27-1Q3LI81 207 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 FAM90A2PQ658T7 463 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 ZNF573Q86YE8 665 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 OR1L1Q8NH94 360 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 AESQ08117 197 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 FGFRL1Q8N441 504 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 OR52L2PQ8NGH6 319 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 SDSLQ96GA7 329 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 TMEM204Q9BSN7 226 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 B4GALT7Q9UBV7 327 aa11.9□□□□□ -0.5
COL6A1-207ENST00000612273 IGKV1D-33P01593 117 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 IGKV1-33P01594 117 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 CTXN2P0C2S0 81 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 MDH2P40926 338 aaKnown RBP11.89□□□□□ -0.51
COL6A1-207ENST00000612273 DRAM1Q8N682 238 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 ZNF525Q8N782 197 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 WDYHV1Q96HA8 205 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 OR2D2Q9H210 308 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 LAMP3Q9UQV4 416 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 A0A1W2PPQ1 181 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 ZNF737O75373 536 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 UBE2G2P60604 165 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 SLC38A11Q08AI6 406 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 SSPNQ14714 243 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 ZNF585BQ52M93 769 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 UNQ6494/PRO21346Q6UXR6 183 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 H1FOOQ8IZA3 346 aaPredicted RBP11.89□□□□□ -0.51
COL6A1-207ENST00000612273 FAM173AQ9BQD7 235 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 ELOVL1Q9BW60 279 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 OBP2BQ9NPH6 170 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 ZMAT5Q9UDW3 170 aaKnown RBP11.89□□□□□ -0.51
COL6A1-207ENST00000612273 SMG1Q96Q15 3661 aaKnown RBP11.89□□□□□ -0.51
COL6A1-207ENST00000612273 BTBD17A6NE02 478 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms