RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 C12orf4Q9NQ89 552 aa11.51□□□□□ -0.57
HDDC2-204ENST00000608295 LRRC42Q9Y546 428 aa11.51□□□□□ -0.57
HDDC2-204ENST00000608295 SAA2-SAA4A0A096LPE2 208 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 TRAV1-2A0A0B4J238 106 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 FOXI3A8MTJ6 420 aaPredicted RBP11.5□□□□□ -0.57
HDDC2-204ENST00000608295 KCNAB3O43448 404 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 MRPS14O60783 128 aaKnown RBP11.5□□□□□ -0.57
HDDC2-204ENST00000608295 SCTP09683 121 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 CLEC2LP0C7M8 214 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 SAA2P0DJI9 122 aaPredicted RBP11.5□□□□□ -0.57
HDDC2-204ENST00000608295 CD37P11049 281 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 GNB3P16520 340 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 GADD45AP24522 165 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 TMEM50BP56557 158 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 DEFA6Q01524 100 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 TMEM30BQ3MIR4 351 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 ZNF329Q86UD4 541 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 OR56B1Q8NGI3 324 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 ST6GALNAC6Q969X2 333 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 R3HDM4Q96D70 268 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 STUB1Q9UNE7 303 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 SSR3Q9UNL2 185 aa11.5□□□□□ -0.57
HDDC2-204ENST00000608295 SERPINE3A8MV23 424 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 M0QZK8 103 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 LDLRAD4O15165 306 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 HSPA12AO43301 675 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 CD3GP09693 182 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 LSAMPQ13449 338 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 RPL39P5Q59GN2 51 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 MOB1BQ7L9L4 216 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 IZUMO1Q8IYV9 350 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 FAM89BQ8N5H3 189 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 C8orf31Q8N9H6 132 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 DTX3Q8N9I9 347 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 OR2T10Q8NGZ9 312 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 RAB3CQ96E17 227 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 ABHD14BQ96IU4 210 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 ATG5Q9H1Y0 275 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 DAPK2Q9UIK4 370 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 RAB22AQ9UL26 194 aa11.49□□□□□ -0.57
HDDC2-204ENST00000608295 TCRBV4S1A1TA0A5B7 111 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 PSMB11A5LHX3 300 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 LINC01548A6NM66 108 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 ADARB2-AS1A8MUL3 147 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 WIPF1O43516 503 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 RGS11O94810 467 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 MOSP00540 346 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 SNRPBP14678 240 aaKnown RBP11.48□□□□□ -0.57
HDDC2-204ENST00000608295 CNTFRP26992 372 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 TGFBR1P36897 503 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 PSMD7P51665 324 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 MRPS15P82914 257 aaKnown RBP11.48□□□□□ -0.57
HDDC2-204ENST00000608295 MMDQ15546 238 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 TCTEX1D4Q5JR98 221 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 ZNF880Q6PDB4 577 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 GLDNQ6ZMI3 551 aaPredicted RBP11.48□□□□□ -0.57
HDDC2-204ENST00000608295 SLC35E3Q7Z769 313 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 THNSL2Q86YJ6 484 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 ODF3L1Q8IXM7 274 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 LGALS14Q8TCE9 139 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 WIPF2Q8TF74 440 aaPredicted RBP11.48□□□□□ -0.57
HDDC2-204ENST00000608295 YTHDF1Q9BYJ9 559 aaKnown RBP11.48□□□□□ -0.57
HDDC2-204ENST00000608295 IFI27L2Q9H2X8 130 aa11.48□□□□□ -0.57
HDDC2-204ENST00000608295 ZNF230Q9UIE0 474 aaPredicted RBP11.48□□□□□ -0.57
HDDC2-204ENST00000608295 ELF5Q9UKW6 265 aaPredicted RBP11.48□□□□□ -0.57
HDDC2-204ENST00000608295 BET1O15155 118 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 TXNL1O43396 289 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 YPEL1O60688 119 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 PF4V1P10720 104 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 CD36P16671 472 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 SDC2P34741 201 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 ZNF137PP52743 207 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 F2RL1P55085 397 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 HTD2P86397 168 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 ARFRP1Q13795 201 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 Q3ZCU0 254 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 KCTD21Q4G0X4 260 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 FAM131AQ6UXB0 335 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 ZNF554Q86TJ5 538 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 OR4X2Q8NGF9 303 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 OR10R2Q8NGX6 335 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 YPEL2Q96QA6 119 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 NABP2Q9BQ15 211 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 HSPB9Q9BQS6 159 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 Q9N2K0 584 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 RNF150Q9ULK6 438 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 HSF4Q9ULV5 492 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 KCNK7Q9Y2U2 307 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 PLXNB1O43157 2135 aa11.47□□□□□ -0.57
HDDC2-204ENST00000608295 IGKV1-6A0A0C4DH72 117 aa11.46□□□□□ -0.57
HDDC2-204ENST00000608295 G3V4G9 280 aa11.46□□□□□ -0.57
HDDC2-204ENST00000608295 FGF16O43320 207 aa11.46□□□□□ -0.57
HDDC2-204ENST00000608295 LANCL1O43813 399 aa11.46□□□□□ -0.57
HDDC2-204ENST00000608295 FCGR3AP08637 254 aa11.46□□□□□ -0.57
HDDC2-204ENST00000608295 CD1BP29016 333 aa11.46□□□□□ -0.57
HDDC2-204ENST00000608295 LSM3P62310 102 aaKnown RBP11.46□□□□□ -0.57
HDDC2-204ENST00000608295 STEAP3Q658P3 488 aa11.46□□□□□ -0.57
HDDC2-204ENST00000608295 LCNL1Q6ZST4 164 aa11.46□□□□□ -0.57
HDDC2-204ENST00000608295 NDUFA11Q86Y39 141 aa11.46□□□□□ -0.57
HDDC2-204ENST00000608295 Q8N6K4 173 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms