RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CST11Q9H112 138 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 KLK15Q9H2R5 256 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 ZNF107Q9UII5 783 aaPredicted RBP5.95□□□□□ -1.46
CUX1-219ENST00000606749 SCOCQ9UIL1 159 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 ZNF580Q9UK33 172 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 JPT1Q9UK76 154 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 ERGIC3Q9Y282 383 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 PTGES3LE9PB15 166 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 G3V318 75 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 CASQ2O14958 399 aaPredicted RBP5.94□□□□□ -1.46
CUX1-219ENST00000606749 RGS11O94810 467 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 UBBP0CG47 229 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 OR5H8P0DN80 308 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 CD37P11049 281 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 SRMP19623 302 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 MYF6P23409 242 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 CHATP28329 748 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 HTR2CP28335 458 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 PPIFP30405 207 aaKnown RBP5.94□□□□□ -1.46
CUX1-219ENST00000606749 OR3A3P47888 321 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 LUMP51884 338 aaPredicted RBP5.94□□□□□ -1.46
CUX1-219ENST00000606749 ACTBP60709 375 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 RPS27AP62979 156 aaKnown RBP5.94□□□□□ -1.46
CUX1-219ENST00000606749 GABPB1Q06547 395 aaPredicted RBP5.94□□□□□ -1.46
CUX1-219ENST00000606749 DCTN2Q13561 401 aaKnown RBP5.94□□□□□ -1.46
CUX1-219ENST00000606749 MMDQ15546 238 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 HMGN3Q15651 99 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 NKAPLQ5M9Q1 402 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 C1orf100Q5SVJ3 147 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 C9orf66Q5T8R8 295 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 RNLSQ5VYX0 342 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 GLT8D1Q68CQ7 371 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 OR10K2Q6IF99 312 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 LIN54Q6MZP7 749 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 TMEM65Q6PI78 240 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 ZNF833PQ6ZTB9 187 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 C6orf201Q7Z4U5 140 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 ZNF491Q8N8L2 437 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 NPBQ8NG41 125 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 OR11H1Q8NG94 326 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 MYOZ3Q8TDC0 251 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 PHYHIPQ92561 330 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 UBE2E2Q96LR5 201 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 ZNF251Q9BRH9 671 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 MRPL20Q9BYC9 149 aaKnown RBP5.94□□□□□ -1.46
CUX1-219ENST00000606749 ANKRD60Q9BZ19 345 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 OR51J1Q9H342 316 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 LSM4Q9Y4Z0 139 aaKnown RBP5.94□□□□□ -1.46
CUX1-219ENST00000606749 WSB1Q9Y6I7 421 aa5.94□□□□□ -1.46
CUX1-219ENST00000606749 SAA2-SAA4A0A096LPE2 208 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 IGHV7-81A0A0B4J1V7 117 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 SEC14L6B5MCN3 397 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 I3L521 148 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 SLC22A1O15245 554 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 ATP6V0E1O15342 81 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 NBR2O15453 112 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 NAPSAO96009 420 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 IGLV1-40P01703 118 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 HLA-DRB1P01911 266 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 CDK1P06493 297 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 NHLRC4P0CG21 123 aaPredicted RBP5.93□□□□□ -1.46
CUX1-219ENST00000606749 SAA2P0DJI9 122 aaPredicted RBP5.93□□□□□ -1.46
CUX1-219ENST00000606749 ECI1P42126 302 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 RAB9AP51151 201 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 QRFPP83859 136 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 RUNX1Q01196 453 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 UNC119Q13432 240 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 FHL3Q13643 280 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 SPHARQ15513 63 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 C5orf64Q2M2E5 130 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 ZNF880Q6PDB4 577 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 CEACAM19Q7Z692 300 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 MINDY2Q8NBR6 621 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 OR2AK2Q8NG84 335 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 OR1N2Q8NGR9 330 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 KCNG3Q8TAE7 436 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 IL1F10Q8WWZ1 152 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 WWC2-AS2Q96NR7 200 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 PRR25Q96S07 402 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 NICN1Q9BSH3 213 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 TMED9Q9BVK6 235 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 MND1Q9BWT6 205 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 TM2D1Q9BX74 207 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 TMEM59Q9BXS4 323 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 GNB4Q9HAV0 340 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.93□□□□□ -1.46
CUX1-219ENST00000606749 PLEKHJ1Q9NW61 149 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 ABRACLQ9P1F3 81 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 VSIG4Q9Y279 399 aa5.93□□□□□ -1.46
CUX1-219ENST00000606749 LSM2Q9Y333 95 aaKnown RBP5.93□□□□□ -1.46
CUX1-219ENST00000606749 A0A0A6YYD4 124 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 TRAV41A0A0B4J266 112 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 TMEM14DPA8MWL7 114 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 FCN1O00602 326 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 RAB29O14966 203 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 ST8SIA5O15466 376 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 NDUFA3O95167 84 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 UCHL1P09936 223 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 OR8U8P0C7N1 319 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 CT45A6P0DMU7 189 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms