RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, human

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-208	ENST00000604743	MOGAT2	Q3SYC2	334 aa		11.48	□□□□□ -0.57
TUBE1-208	ENST00000604743	PLAC9	Q5JTB6	97 aa		11.48	□□□□□ -0.57
TUBE1-208	ENST00000604743	ST6GALNAC6	Q969X2	333 aa		11.48	□□□□□ -0.57
TUBE1-208	ENST00000604743	ABHD14A	Q9BUJ0	271 aa		11.48	□□□□□ -0.57
TUBE1-208	ENST00000604743	RIMS4	Q9H426	269 aa	Predicted RBP	11.48	□□□□□ -0.57
TUBE1-208	ENST00000604743	RNF167	Q9H6Y7	350 aa		11.48	□□□□□ -0.57
TUBE1-208	ENST00000604743	NCBP2L	A6PVI3	153 aa	Known RBP	11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	ZNF736	B4DX44	427 aa	Predicted RBP	11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743		M0QZK8	103 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	YPEL1	O60688	119 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	CD36	P16671	472 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	GADD45A	P24522	165 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	HLA-DRB3	P79483	266 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	MRPS15	P82914	257 aa	Known RBP	11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	MXD1	Q05195	221 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	ZNF880	Q6PDB4	577 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	MOB1B	Q7L9L4	216 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	OR2AK2	Q8NG84	335 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	OR2T10	Q8NGZ9	312 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	RAB3C	Q96E17	227 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	EAF1	Q96JC9	268 aa	Predicted RBP	11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	KCTD7	Q96MP8	289 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	YPEL2	Q96QA6	119 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	WNT10A	Q9GZT5	417 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	ATG5	Q9H1Y0	275 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	MMP27	Q9H306	513 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	C12orf4	Q9NQ89	552 aa		11.47	□□□□□ -0.57
TUBE1-208	ENST00000604743	NOTO	A8MTQ0	251 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	ST8SIA5	O15466	376 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	SCT	P09683	121 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	CD3G	P09693	182 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	CLEC2L	P0C7M8	214 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	GNB3	P16520	340 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	SDC2	P34741	201 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	OR3A3	P47888	321 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	STEAP3	Q658P3	488 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	TPRA1	Q86W33	373 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	OR5AU1	Q8NGC0	362 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	OR10R2	Q8NGX6	335 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743		Q9N2K0	584 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	SLC23A1	Q9UHI7	598 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	DAPK2	Q9UIK4	370 aa		11.46	□□□□□ -0.57
TUBE1-208	ENST00000604743	TRBV6-6	A0A0A6YYG2	114 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	METTL21EP	A6NDL7	271 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	HSPA12A	O43301	675 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	TXNL1	O43396	289 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	RAB6A	P20340	208 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	CD1B	P29016	333 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	ZNF137P	P52743	207 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	EBI3	Q14213	229 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	ODF3L1	Q8IXM7	274 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	IZUMO1	Q8IYV9	350 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	C5orf56	Q8N8D9	126 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	TSPAN14	Q8NG11	270 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	CITED2	Q99967	270 aa	Predicted RBP	11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	OR1A1	Q9P1Q5	309 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	MGAT4A	Q9UM21	535 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743	KCNK7	Q9Y2U2	307 aa		11.45	□□□□□ -0.58
TUBE1-208	ENST00000604743		A0A087WXM4	84 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	SAA2-SAA4	A0A096LPE2	208 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743		A0A1W2PRX2	142 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	RAB27B	O00194	218 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	FGF16	O43320	207 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	LANCL1	O43813	399 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	TNFAIP8	O95379	198 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	MOS	P00540	346 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	SAA2	P0DJI9	122 aa	Predicted RBP	11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	SNRPB	P14678	240 aa	Known RBP	11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	ZBTB25	P24278	435 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	CEACAM6	P40199	344 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	ARFRP1	Q13795	201 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	SFXN4	Q6P4A7	337 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	C10orf99	Q6UWK7	81 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	WIPF2	Q8TF74	440 aa	Predicted RBP	11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	MAFIP	Q8WZ33	124 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	CENPO	Q9BU64	300 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	MRPL20	Q9BYC9	149 aa	Known RBP	11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	PARP12	Q9H0J9	701 aa	Known RBP	11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	LINC00527	Q9UJ94	153 aa		11.44	□□□□□ -0.58
TUBE1-208	ENST00000604743	TRDC	B7Z8K6	153 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	HIST1H1D	P16402	221 aa	Known RBP	11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	LSAMP	Q13449	338 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	LY6G6F	Q5SQ64	297 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	IDNK	Q5T6J7	187 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743		Q8N6K4	173 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	LGALS14	Q8TCE9	139 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	PTX4	Q96A99	478 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	ABHD14B	Q96IU4	210 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	NOL4L	Q96MY1	436 aa	Predicted RBP	11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	IFI27L2	Q9H2X8	130 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	VCX3A	Q9NNX9	186 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	RNF150	Q9ULK6	438 aa		11.43	□□□□□ -0.58
TUBE1-208	ENST00000604743	TCRBV4S1A1T	A0A5B7	111 aa		11.42	□□□□□ -0.58
TUBE1-208	ENST00000604743	SERPINE3	A8MV23	424 aa		11.42	□□□□□ -0.58
TUBE1-208	ENST00000604743	MFNG	O00587	321 aa		11.42	□□□□□ -0.58
TUBE1-208	ENST00000604743	BET1	O15155	118 aa		11.42	□□□□□ -0.58
TUBE1-208	ENST00000604743	FCGR3A	P08637	254 aa		11.42	□□□□□ -0.58
TUBE1-208	ENST00000604743	TGFBR1	P36897	503 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms