RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 GUCA1AP43080 201 aaPredicted RBP13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 TMEM50BP56557 158 aa13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 PLPPR5Q32ZL2 321 aa13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 C16orf54Q6UWD8 224 aa13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 BAGE3Q86Y29 109 aa13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 BAGE2Q86Y30 109 aa13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 FBXL14Q8N1E6 418 aa13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 OR2M3Q8NG83 312 aa13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 TMEM170AQ8WVE7 144 aa13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 GPR84Q9NQS5 396 aa13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 CACNA1AO00555 2505 aa13.23□□□□□ -0.29
PPFIA3-206ENST00000602655 ARHGAP21Q5T5U3 1957 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 NPIPA2E9PIF3 369 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 NPIPA3F8WFD2 350 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 MS4A18H0YCH9 400 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 NKX2-1P43699 371 aaPredicted RBP13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 SUMO1P63165 101 aaKnown RBP13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 MS4A18Q3C1V0 323 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 SPIN3Q5JUX0 258 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 CTDSP1Q9GZU7 261 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 OR10A2Q9H208 303 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 OSGIN2Q9Y236 505 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 A0A1B0GW64 132 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 IGFBP3P17936 291 aaPredicted RBP13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 FAM78BQ5VT40 261 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 ZNF837Q96EG3 531 aaPredicted RBP13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 RYDENQ9NUL5 291 aaKnown RBP13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 PLEKHJ1Q9NW61 149 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 R4GMQ9 66 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 NUPR1O60356 82 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 ZNF728P0DKX0 622 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 ARG2P78540 354 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 EXT1Q16394 746 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 KCNMB1Q16558 191 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 FAM90A2PQ658T7 463 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 ABHD12BQ7Z5M8 362 aaPredicted RBP13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 SCGB1C1Q8TD33 95 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 PTX4Q96A99 478 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 HDHD3Q9BSH5 251 aaPredicted RBP13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 Q9N2K0 584 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 TUBD1Q9UJT1 453 aa13.22□□□□□ -0.29
PPFIA3-206ENST00000602655 UBE2V1Q13404 147 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 OR52N5Q8NH56 324 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 OR51E1Q8TCB6 317 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 GNPNAT1Q96EK6 184 aaPredicted RBP13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 GTF3C1Q12789 2109 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 RER1O15258 196 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 PTGDSP41222 190 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 RRADP55042 308 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 ZNF154Q13106 437 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 CORO2AQ92828 525 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 NCOR1P1Q9H4R4 102 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 TMEM106BQ9NUM4 274 aa13.21□□□□□ -0.29
PPFIA3-206ENST00000602655 SHANK1Q9Y566 2161 aa13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 A0A0A6YYD4 124 aa13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 TRDCB7Z8K6 153 aa13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 BCL2P10415 239 aa13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 HSD11B1P28845 292 aa13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 GCH1P30793 250 aa13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 MAGEA5P43359 124 aa13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 IL13RA2Q14627 380 aa13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 DEFB109BQ30KR1 87 aa13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 PLA2G2CQ5R387 149 aa13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 UBE2J1Q9Y385 318 aaPredicted RBP13.21□□□□□ -0.3
PPFIA3-206ENST00000602655 A0A0J9YW62 118 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 TMEM238C9JI98 176 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 TPPP2P59282 170 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 ABHD3Q8WU67 409 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 TXNIPQ9H3M7 391 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 MANBALQ9NQG1 85 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 IGHV3-64DA0A0J9YX35 117 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 IGSF23A1L1A6 192 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 WISP2O76076 250 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 RIPPLY3P57055 190 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 KCNIP4Q6PIL6 250 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 C12orf49Q9H741 205 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 MED13LQ71F56 2210 aa13.2□□□□□ -0.3
PPFIA3-206ENST00000602655 A0A096LPE4 126 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 A0A1W2PPZ6 126 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 LRRC3CA6NJW4 275 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 FSTP19883 344 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 CDKN1AP38936 164 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 OR1C1Q15619 314 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 C6orf201Q7Z4U5 140 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 PLK3Q9H4B4 646 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 SLC2A9Q9NRM0 540 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 LAMTOR2Q9Y2Q5 125 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 CACNA1BQ00975 2339 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 LIPT2A6NK58 231 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 HSBP1L1C9JCN9 74 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 GNRHRP30968 328 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 GCNT2Q8N0V5 402 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 OR51G1Q8NGK1 321 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 RSG1Q9BU20 258 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 WDR54Q9H977 334 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 TMEM242Q9NWH2 141 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 NAT8Q9UHE5 227 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 PFN1P07737 140 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms