RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ZNF554Q86TJ5 538 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 ZNF491Q8N8L2 437 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 SETD9Q8NE22 299 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 OR1N2Q8NGR9 330 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 ZNF251Q9BRH9 671 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 ANKRD60Q9BZ19 345 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 OR51J1Q9H342 316 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 VSIG4Q9Y279 399 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 ZNF256Q9Y2P7 627 aaPredicted RBP10.24□□□□□ -0.77
RPS28-204ENST00000602140 IGHV7-81A0A0B4J1V7 117 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 NBR2O15453 112 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 YPEL1O60688 119 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 LY86O95711 162 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 IGLV1-40P01703 118 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 OR8U8P0C7N1 319 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 OR3A3P47888 321 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 GNB1P62873 340 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 HTD2P86397 168 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 ZNF616Q08AN1 781 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 ZNF833PQ6ZTB9 187 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 DHRSXQ8N5I4 330 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 NKAIN3Q8N8D7 197 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 GALMQ96C23 342 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 YPEL2Q96QA6 119 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 UQCC2Q9BRT2 126 aa10.23□□□□□ -0.77
RPS28-204ENST00000602140 SAA2-SAA4A0A096LPE2 208 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 TRAV41A0A0B4J266 112 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 EFCAB10A6NFE3 127 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 MYL12BO14950 172 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 RGS11O94810 467 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 SAA2P0DJI9 122 aaPredicted RBP10.22□□□□□ -0.77
RPS28-204ENST00000602140 BLVRBP30043 206 aaPredicted RBP10.22□□□□□ -0.77
RPS28-204ENST00000602140 RAB9AP51151 201 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 INSL3P51460 131 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 RUNX1Q01196 453 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 C5orf64Q2M2E5 130 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 C6orf141Q5SZD1 244 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 LIN54Q6MZP7 749 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 OR2AK2Q8NG84 335 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 SULT4A1Q9BR01 284 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 CST11Q9H112 138 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 CNOT2Q9NZN8 540 aaKnown RBP10.22□□□□□ -0.77
RPS28-204ENST00000602140 KIAA1456Q9P272 454 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 GHRLQ9UBU3 117 aa10.22□□□□□ -0.77
RPS28-204ENST00000602140 CD1AP06126 327 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 MAPK3P27361 379 aaPredicted RBP10.21□□□□□ -0.77
RPS28-204ENST00000602140 CHATP28329 748 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 WNT4P56705 351 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 INSL4Q14641 139 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 HMGN3Q15651 99 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 LY6G6FQ5SQ64 297 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 OR10K2Q6IF99 312 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 AHSA2Q719I0 299 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 MINDY2Q8NBR6 621 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 NPBQ8NG41 125 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 IL1F10Q8WWZ1 152 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 DCUN1D4Q92564 292 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 THRSPQ92748 146 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 NEDD4LQ96PU5 975 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 FAAP24Q9BTP7 215 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 ABRACLQ9P1F3 81 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 PSORS1C1Q9UIG5 152 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 LRRC42Q9Y546 428 aa10.21□□□□□ -0.77
RPS28-204ENST00000602140 A0A1W2PN81 502 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 OVOL1O14753 267 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 ST8SIA5O15466 376 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 NDUFA3O95167 84 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 GNAO1P09471 354 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 CHRNA7P36544 502 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 NDPQ00604 133 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 ECSCRQ19T08 205 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 FAM27D1Q5T7N8 215 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 LAIR2Q6ISS4 152 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 FAM131AQ6UXB0 335 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 C6orf201Q7Z4U5 140 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 ZNF429Q86V71 674 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 PACRGLQ8N7B6 248 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 ALX4Q9H161 411 aaPredicted RBP10.2□□□□□ -0.78
RPS28-204ENST00000602140 IFI27L2Q9H2X8 130 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 C8orf4Q9NR00 106 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 STEAP1Q9UHE8 339 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 ERGIC3Q9Y282 383 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 FBXO7Q9Y3I1 522 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 SMAD5-AS1Q9Y6J3 95 aa10.2□□□□□ -0.78
RPS28-204ENST00000602140 EBAG9O00559 213 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 SOX15O60248 233 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 UBBP0CG47 229 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 HTR2CP28335 458 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 SLURP1P55000 103 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 RPS27AP62979 156 aaKnown RBP10.19□□□□□ -0.78
RPS28-204ENST00000602140 ACSM3Q53FZ2 586 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 RPL39P5Q59GN2 51 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 GLT8D1Q68CQ7 371 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 C8orf59Q8N0T1 100 aaPredicted RBP10.19□□□□□ -0.78
RPS28-204ENST00000602140 SVOPQ8N4V2 548 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 NANOGP1Q8N7R0 232 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 BPIFB6Q8NFQ5 453 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 CASTOR1Q8WTX7 329 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 DLX4Q92988 240 aaPredicted RBP10.19□□□□□ -0.78
RPS28-204ENST00000602140 TMEM59Q9BXS4 323 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms