RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 HMGN3Q15651 99 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 TBCEQ15813 527 aaPredicted RBP12.38□□□□□ -0.43
IRF3-226ENST00000600453 RAB11BQ15907 218 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 TEX38Q6PEX7 206 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 ZNF367Q7RTV3 350 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 STPG2Q8N412 459 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 FAM89BQ8N5H3 189 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 OR2AK2Q8NG84 335 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 S1PR3Q99500 378 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 CHCHD6Q9BRQ6 235 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 HSF4Q9ULV5 492 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 V9GY05 133 aa12.38□□□□□ -0.43
IRF3-226ENST00000600453 TRBV6-6A0A0A6YYG2 114 aa12.37□□□□□ -0.43
IRF3-226ENST00000600453 NAPSAO96009 420 aa12.37□□□□□ -0.43
IRF3-226ENST00000600453 CALRP27797 417 aaKnown RBP12.37□□□□□ -0.43
IRF3-226ENST00000600453 PNLIPRP3Q17RR3 467 aa12.37□□□□□ -0.43
IRF3-226ENST00000600453 OXLD1Q5BKU9 147 aa12.37□□□□□ -0.43
IRF3-226ENST00000600453 FAM53AQ6NSI3 398 aaPredicted RBP12.37□□□□□ -0.43
IRF3-226ENST00000600453 ZNF329Q86UD4 541 aa12.37□□□□□ -0.43
IRF3-226ENST00000600453 Q8N9W7 124 aa12.37□□□□□ -0.43
IRF3-226ENST00000600453 RCC1LQ96I51 464 aaKnown RBP12.37□□□□□ -0.43
IRF3-226ENST00000600453 NICN1Q9BSH3 213 aa12.37□□□□□ -0.43
IRF3-226ENST00000600453 LPAR5Q9H1C0 372 aa12.37□□□□□ -0.43
IRF3-226ENST00000600453 PLSCR3Q9NRY6 295 aa12.37□□□□□ -0.43
IRF3-226ENST00000600453 PIPOXQ9P0Z9 390 aa12.37□□□□□ -0.43
IRF3-226ENST00000600453 TGP01266 2768 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 SOX6P35712 828 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 PPP1CCP36873 323 aaKnown RBP12.36□□□□□ -0.43
IRF3-226ENST00000600453 MAP2K4P45985 399 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 GPR12P47775 334 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 FABP5Q01469 135 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 C2orf76Q3KRA6 126 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 FAM71F2Q6NXP2 309 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 ZNF880Q6PDB4 577 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 C10orf99Q6UWK7 81 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 OR56B1Q8NGI3 324 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 SETD6Q8TBK2 473 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 IL1F10Q8WWZ1 152 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 FAM3DQ96BQ1 224 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 NOL4LQ96MY1 436 aaPredicted RBP12.36□□□□□ -0.43
IRF3-226ENST00000600453 GPR61Q9BZJ8 451 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 Q9H521 79 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 NECAP2Q9NVZ3 263 aa12.36□□□□□ -0.43
IRF3-226ENST00000600453 TRAV1-2A0A0B4J238 106 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 ZNF736B4DX44 427 aaPredicted RBP12.35□□□□□ -0.43
IRF3-226ENST00000600453 ITGB1BP1O14713 200 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 RAB29O14966 203 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 SOCS1O15524 211 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 DENRO43583 198 aaKnown RBP12.35□□□□□ -0.43
IRF3-226ENST00000600453 OR5H8P0DN80 308 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 GALP22466 123 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 ZBTB25P24278 435 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 RPL23AP62750 156 aaKnown RBP12.35□□□□□ -0.43
IRF3-226ENST00000600453 MRPS15P82914 257 aaKnown RBP12.35□□□□□ -0.43
IRF3-226ENST00000600453 LSAMPQ13449 338 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 P2RY14Q15391 338 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 SVOPQ8N4V2 548 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 EDARADDQ8WWZ3 215 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 PHF21AQ96BD5 680 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 ZNF251Q9BRH9 671 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 RAB22AQ9UL26 194 aa12.35□□□□□ -0.43
IRF3-226ENST00000600453 NUDT19A8MXV4 375 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 HSPA12AO43301 675 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 ELANEP08246 267 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 MC5RP33032 325 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 MYCNOSP40205 109 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 VEGFCP49767 419 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 F2RL1P55085 397 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 GABARAPL2P60520 117 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 GNMTQ14749 295 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 CXorf66Q5JRM2 361 aaPredicted RBP12.34□□□□□ -0.43
IRF3-226ENST00000600453 ZNF833PQ6ZTB9 187 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 FAM71E2Q8N5Q1 922 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 GFI1Q99684 422 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 CMSS1Q9BQ75 279 aaKnown RBP12.34□□□□□ -0.43
IRF3-226ENST00000600453 CENPOQ9BU64 300 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 MCRIP2Q9BUT9 160 aaKnown RBP12.34□□□□□ -0.43
IRF3-226ENST00000600453 YTHDF1Q9BYJ9 559 aaKnown RBP12.34□□□□□ -0.43
IRF3-226ENST00000600453 SLC23A1Q9UHI7 598 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 AK3Q9UIJ7 227 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 LINC00527Q9UJ94 153 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 ZNF580Q9UK33 172 aa12.34□□□□□ -0.43
IRF3-226ENST00000600453 TRDV1A0A1B0GX56 115 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 IGLL1P15814 213 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 VDAC1P21796 283 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 MYL9P24844 172 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 CEACAM6P40199 344 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 TMEM50BP56557 158 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 ACTBP60709 375 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 FOXE3Q13461 319 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 MMDQ15546 238 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 ZNF695Q8IW36 515 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 ODF3L1Q8IXM7 274 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 NABP2Q9BQ15 211 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 KCNK15Q9H427 330 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 C12orf4Q9NQ89 552 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 NDUFB11Q9NX14 153 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 KIAA1456Q9P272 454 aa12.33□□□□□ -0.44
IRF3-226ENST00000600453 ZMAT5Q9UDW3 170 aaKnown RBP12.33□□□□□ -0.44
IRF3-226ENST00000600453 SAA2-SAA4A0A096LPE2 208 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms