RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 TOR1AO14656 332 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 CLEC2LP0C7M8 214 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 HTR2CP28335 458 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 PRRX1P54821 245 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 NCS1P62166 190 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 LSM3P62310 102 aaKnown RBP13.57□□□□□ -0.24
SSBP4-207ENST00000600244 NHLRC3Q5JS37 347 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 UTF1Q5T230 341 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 GLIPR1L1Q6UWM5 242 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 EMG1Q92979 244 aaKnown RBP13.57□□□□□ -0.24
SSBP4-207ENST00000600244 METTL9Q9H1A3 318 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 RETNQ9HD89 108 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 IL36RNQ9UBH0 155 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 ING4Q9UNL4 249 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 KIAA2026Q5HYC2 2103 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 A0A087X0M5 115 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 A0A1B0GX30 115 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 NOTOA8MTQ0 251 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 AIPO00170 330 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 ZNF780AO75290 641 aaPredicted RBP13.56□□□□□ -0.24
SSBP4-207ENST00000600244 UBBP0CG47 229 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 ERP29P30040 261 aaKnown RBP13.56□□□□□ -0.24
SSBP4-207ENST00000600244 TMBIM6P55061 237 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 GPR176Q14439 515 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 RSU1Q15404 277 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 GRK1Q15835 563 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 SPIN3Q5JUX0 258 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 AWAT2Q6E213 333 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 FAM53AQ6NSI3 398 aaPredicted RBP13.56□□□□□ -0.24
SSBP4-207ENST00000600244 TGIF2LXQ8IUE1 241 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 ZNF491Q8N8L2 437 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 OR10K1Q8NGX5 313 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 RPEQ96AT9 228 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 BCL7BQ9BQE9 202 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 HIPK2Q9H2X6 1198 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 GHITMQ9H3K2 345 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 CEPT1Q9Y6K0 416 aa13.56□□□□□ -0.24
SSBP4-207ENST00000600244 A0A1W2PP11 408 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 TMEM14DPA8MWL7 114 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 PSPNO60542 156 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 BPNT1O95861 308 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 IL1AP01583 271 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 CALCBP10092 127 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 RPS19P39019 145 aaKnown RBP13.55□□□□□ -0.24
SSBP4-207ENST00000600244 VBP1P61758 197 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 EBI3Q14213 229 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 SLC22A6Q4U2R8 563 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 TRAPPC6BQ86SZ2 158 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 CLVS1Q8IUQ0 354 aaPredicted RBP13.55□□□□□ -0.24
SSBP4-207ENST00000600244 TMEM104Q8NE00 496 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 RAB2BQ8WUD1 216 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 CORO2AQ92828 525 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 TOMM40LQ969M1 308 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 MRPS24Q96EL2 167 aaKnown RBP13.55□□□□□ -0.24
SSBP4-207ENST00000600244 CHST6Q9GZX3 395 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 RBM38Q9H0Z9 239 aaKnown RBP13.55□□□□□ -0.24
SSBP4-207ENST00000600244 KLK15Q9H2R5 256 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 GAL3ST2Q9H3Q3 398 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 PLGRKTQ9HBL7 147 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 LIN7CQ9NUP9 197 aaKnown RBP13.55□□□□□ -0.24
SSBP4-207ENST00000600244 STEAP1Q9UHE8 339 aa13.55□□□□□ -0.24
SSBP4-207ENST00000600244 SMIM30A4D0T7 59 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 HSPA12AO43301 675 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 HTR3BO95264 441 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 IGKV1D-33P01593 117 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 IGKV1-33P01594 117 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 PRKACAP17612 351 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 P2RX3P56373 397 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 MXD1Q05195 221 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 UNC119Q13432 240 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 RBM39Q14498 530 aaKnown RBP13.54□□□□□ -0.24
SSBP4-207ENST00000600244 IL13RA2Q14627 380 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 RAB11BQ15907 218 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 HES5Q5TA89 166 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 Q6P435 159 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 SFXN4Q6P4A7 337 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 S100A13Q99584 98 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 FAM110AQ9BQ89 295 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 TAS2R3Q9NYW6 316 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 VSIG4Q9Y279 399 aa13.54□□□□□ -0.24
SSBP4-207ENST00000600244 MGST3O14880 152 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 TMEM127O75204 238 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 SLC2A2P11168 524 aaPredicted RBP13.53□□□□□ -0.24
SSBP4-207ENST00000600244 GTF2F2P13984 249 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 ARSBP15848 533 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 SERPINA2P20848 420 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 DUSP1P28562 367 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 CLDN12P56749 244 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 RBM11P57052 281 aaKnown RBP13.53□□□□□ -0.24
SSBP4-207ENST00000600244 DIAPH2-AS1Q14236 149 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 P2RY14Q15391 338 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 C2orf76Q3KRA6 126 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 Q8N9W7 124 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 ARPC1AQ92747 370 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 FAM3DQ96BQ1 224 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 OR5B12Q96R08 314 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 ST6GALNAC5Q9BVH7 336 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 IFT22Q9H7X7 185 aa13.53□□□□□ -0.24
SSBP4-207ENST00000600244 C12orf77C9JDV5 145 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 HAND1O96004 215 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms