RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 LANCL1O43813 399 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 TSPAN15O95858 294 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 CD28P10747 220 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 ZBTB25P24278 435 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 PPP1CCP36873 323 aaKnown RBP11.27□□□□□ -0.61
LIG1-218ENST00000599322 TALDO1P37837 337 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 DIAPH2-AS1Q14236 149 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 HMGN3Q15651 99 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 KHDC1LQ5JSQ8 128 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 C22orf42Q6IC83 251 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 ZNF773Q6PK81 442 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 CD200R1LQ6Q8B3 271 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 SLC35E3Q7Z769 313 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 CHPT1Q8WUD6 406 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 EDARADDQ8WWZ3 215 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 R3HDM4Q96D70 268 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 RAB3CQ96E17 227 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.61
LIG1-218ENST00000599322 KCNK15Q9H427 330 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 PIPOXQ9P0Z9 390 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 AK3Q9UIJ7 227 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 STUB1Q9UNE7 303 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 PSMB11A5LHX3 300 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 NAPSAO96009 420 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 PF4V1P10720 104 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 RAB6AP20340 208 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 ZNF137PP52743 207 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 EBI3Q14213 229 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 Q6ZS46 218 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 TPRA1Q86W33 373 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 C5orf56Q8N8D9 126 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 ZNF439Q8NDP4 499 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 ST6GALNAC6Q969X2 333 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 PHF21AQ96BD5 680 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 ARHGAP5-AS1Q96IT6 56 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 GFI1Q99684 422 aa11.26□□□□□ -0.61
LIG1-218ENST00000599322 CITED2Q99967 270 aaPredicted RBP11.26□□□□□ -0.61
LIG1-218ENST00000599322 TSSC4Q9Y5U2 329 aaPredicted RBP11.26□□□□□ -0.61
LIG1-218ENST00000599322 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 TMEM272A0A1B0GTI8 110 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 RAB29O14966 203 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 SLC31A2O15432 143 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 SCGNO76038 276 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 FGF9P31371 208 aaPredicted RBP11.25□□□□□ -0.61
LIG1-218ENST00000599322 CEACAM6P40199 344 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 ZNF134P52741 427 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 HLA-DRB3P79483 266 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 COMMD1Q8N668 190 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 KCTD7Q96MP8 289 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 PECRQ9BY49 303 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 LIN7CQ9NUP9 197 aaKnown RBP11.25□□□□□ -0.61
LIG1-218ENST00000599322 SLC23A1Q9UHI7 598 aa11.25□□□□□ -0.61
LIG1-218ENST00000599322 A0A0A6YYD4 124 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 SH2D7A6NKC9 451 aaPredicted RBP11.24□□□□□ -0.61
LIG1-218ENST00000599322 NOTOA8MTQ0 251 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 SERPINB10P48595 397 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 OR10A3P58181 314 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 ARFRP1Q13795 201 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 GNMTQ14749 295 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 KIR2DS1Q14954 304 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 TIMM50Q3ZCQ8 353 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 KCTD21Q4G0X4 260 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 FAM71F2Q6NXP2 309 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 ZNF880Q6PDB4 577 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 OR10R2Q8NGX6 335 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 PTX4Q96A99 478 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 ZNF251Q9BRH9 671 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 ATG5Q9H1Y0 275 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 TXNL4BQ9NX01 149 aaKnown RBP11.24□□□□□ -0.61
LIG1-218ENST00000599322 KIAA1456Q9P272 454 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 ZNF221Q9UK13 617 aa11.24□□□□□ -0.61
LIG1-218ENST00000599322 A0A075B6Q4 140 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 A0A1W2PRX2 142 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 TRDCB7Z8K6 153 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 AP4M1O00189 453 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 ITGB1BP1O14713 200 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 PF4P02776 101 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 AMY1AP04745 511 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 AMY2AP04746 511 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 CD83Q01151 205 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 LSAMPQ13449 338 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 NEDD8Q15843 81 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 FAM53AQ6NSI3 398 aaPredicted RBP11.23□□□□□ -0.61
LIG1-218ENST00000599322 ABCG5Q9H222 651 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 Q9N2K0 584 aa11.23□□□□□ -0.61
LIG1-218ENST00000599322 LOC100506127A0A0U1RQW1 187 aa11.22□□□□□ -0.61
LIG1-218ENST00000599322 LDLRAD4O15165 306 aa11.22□□□□□ -0.61
LIG1-218ENST00000599322 IGHG2P01859 326 aa11.22□□□□□ -0.61
LIG1-218ENST00000599322 MC5RP33032 325 aa11.22□□□□□ -0.61
LIG1-218ENST00000599322 SOX6P35712 828 aa11.22□□□□□ -0.61
LIG1-218ENST00000599322 NOTCH1P46531 2555 aa11.22□□□□□ -0.61
LIG1-218ENST00000599322 TMEM50BP56557 158 aa11.22□□□□□ -0.61
LIG1-218ENST00000599322 MMDQ15546 238 aa11.22□□□□□ -0.61
LIG1-218ENST00000599322 OR4A4PQ8NGN8 299 aa11.22□□□□□ -0.61
LIG1-218ENST00000599322 CHCHD6Q9BRQ6 235 aa11.22□□□□□ -0.61
LIG1-218ENST00000599322 HDHD3Q9BSH5 251 aaPredicted RBP11.22□□□□□ -0.61
LIG1-218ENST00000599322 RBM7Q9Y580 266 aaKnown RBP11.22□□□□□ -0.61
LIG1-218ENST00000599322 A0A087WXM4 84 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms