RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	INSL4	Q14641	139 aa		11.52	□□□□□ -0.57
IRF3-223	ENST00000599223	RSU1	Q15404	277 aa		11.52	□□□□□ -0.57
IRF3-223	ENST00000599223	SPANXN2	Q5MJ10	180 aa		11.52	□□□□□ -0.57
IRF3-223	ENST00000599223	DDI2	Q5TDH0	399 aa		11.52	□□□□□ -0.57
IRF3-223	ENST00000599223	MOB3B	Q86TA1	216 aa		11.52	□□□□□ -0.57
IRF3-223	ENST00000599223		Q8N9W7	124 aa		11.52	□□□□□ -0.57
IRF3-223	ENST00000599223	WWC2-AS2	Q96NR7	200 aa		11.52	□□□□□ -0.57
IRF3-223	ENST00000599223	PLGRKT	Q9HBL7	147 aa		11.52	□□□□□ -0.57
IRF3-223	ENST00000599223	ZFP57	Q9NU63	452 aa		11.52	□□□□□ -0.57
IRF3-223	ENST00000599223	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	IGHV3-43	A0A0B4J1X8	118 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	GEMIN2	O14893	280 aa	Known RBP	11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	OR7C1	O76099	320 aa	Predicted RBP	11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	IGHV3-43D	P0DP04	118 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	SLC6A1	P30531	599 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	KCNJ3	P48549	501 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	RAB25	P57735	213 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	DCTN2	Q13561	401 aa	Known RBP	11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	NHLRC3	Q5JS37	347 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	TGIF2LX	Q8IUE1	241 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	FOXRED2	Q8IWF2	684 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	OR10A7	Q8NGE5	316 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	BORCS5	Q969J3	196 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	ST6GALNAC6	Q969X2	333 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	TMEM106A	Q96A25	262 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	HSPB9	Q9BQS6	159 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	MCRIP2	Q9BUT9	160 aa	Known RBP	11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	ABCG5	Q9H222	651 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	IFT22	Q9H7X7	185 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	PLSCR3	Q9NRY6	295 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	ST3GAL6	Q9Y274	331 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223	DNAH7	Q8WXX0	4024 aa		11.51	□□□□□ -0.57
IRF3-223	ENST00000599223		A0A1W2PPK0	400 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	TMEM30CP	A0ZSE6	113 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	NOTO	A8MTQ0	251 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	CCL24	O00175	119 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	SDCBP	O00560	298 aa	Predicted RBP	11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	CLEC2L	P0C7M8	214 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	SERPINA2	P20848	420 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	PPP3R1	P63098	170 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	SLC35B1	P78383	322 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	ZNF45	Q02386	682 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	CFHR3	Q02985	330 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	NKAPL	Q5M9Q1	402 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	IDNK	Q5T6J7	187 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	FAM27D1	Q5T7N8	215 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	COMMD1	Q8N668	190 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	CCDC107	Q8WV48	283 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	CPNE2	Q96FN4	548 aa	Predicted RBP	11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	PRR25	Q96S07	402 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	LIN7C	Q9NUP9	197 aa	Known RBP	11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	GFOD1	Q9NXC2	390 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	IL36G	Q9NZH8	169 aa		11.5	□□□□□ -0.57
IRF3-223	ENST00000599223	TRBV5-7	A0A0A0MS05	114 aa		11.49	□□□□□ -0.57
IRF3-223	ENST00000599223	SMIM30	A4D0T7	59 aa		11.49	□□□□□ -0.57
IRF3-223	ENST00000599223	NCBP2L	A6PVI3	153 aa	Known RBP	11.49	□□□□□ -0.57
IRF3-223	ENST00000599223	AP4M1	O00189	453 aa		11.49	□□□□□ -0.57
IRF3-223	ENST00000599223	DGCR2	P98153	550 aa		11.49	□□□□□ -0.57
IRF3-223	ENST00000599223	SFXN4	Q6P4A7	337 aa		11.49	□□□□□ -0.57
IRF3-223	ENST00000599223	LINC00311	Q8N616	119 aa		11.49	□□□□□ -0.57
IRF3-223	ENST00000599223	RNF152	Q8N8N0	203 aa		11.49	□□□□□ -0.57
IRF3-223	ENST00000599223	ZNF439	Q8NDP4	499 aa		11.49	□□□□□ -0.57
IRF3-223	ENST00000599223	ARL11	Q969Q4	196 aa		11.49	□□□□□ -0.57
IRF3-223	ENST00000599223	C12orf77	C9JDV5	145 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	MAGEB3	O15480	346 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	GAPDH	P04406	335 aa	Known RBP	11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	ZNF93	P35789	620 aa	Predicted RBP	11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	TALDO1	P37837	337 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	TEX38	Q6PEX7	206 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	ZNF497	Q6ZNH5	498 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	FAM71E2	Q8N5Q1	922 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	OR2T10	Q8NGZ9	312 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	S1PR3	Q99500	378 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	PALMD	Q9NP74	551 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	TMEM138	Q9NPI0	162 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	ABRACL	Q9P1F3	81 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	COMMD3	Q9UBI1	195 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	DAPK2	Q9UIK4	370 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	ING4	Q9UNL4	249 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	LSM4	Q9Y4Z0	139 aa	Known RBP	11.48	□□□□□ -0.57
IRF3-223	ENST00000599223		V9GY05	133 aa		11.48	□□□□□ -0.57
IRF3-223	ENST00000599223	AIP	O00170	330 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	MT-ND4	P03905	459 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	FST	P19883	344 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	ZNF137P	P52743	207 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	F2RL1	P55085	397 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	FOXE3	Q13461	319 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	FHL3	Q13643	280 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	PNLIPRP3	Q17RR3	467 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	MPV17L	Q2QL34	196 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	SLC22A6	Q4U2R8	563 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	ATAD3C	Q5T2N8	411 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	GLT8D1	Q68CQ7	371 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	NKAIN3	Q8N8D7	197 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	C8orf31	Q8N9H6	132 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	OR52M1	Q8NGK5	317 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	OR8U1	Q8NH10	309 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	METTL9	Q9H1A3	318 aa		11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	AKIP1	Q9NQ31	210 aa		11.47	□□□□□ -0.57

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