RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 ARSBP15848 533 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 F2RL1P55085 397 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 LSAMPQ13449 338 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 RAB11BQ15907 218 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 C2orf76Q3KRA6 126 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 ZNF833PQ6ZTB9 187 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 C18orf65Q6ZTR6 163 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 ZNF329Q86UD4 541 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 TGIF2LXQ8IUE1 241 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 SPARTQ8N0X7 666 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 FAM71E2Q8N5Q1 922 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 OR2T10Q8NGZ9 312 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 FAM3DQ96BQ1 224 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 ARHGAP5-AS1Q96IT6 56 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 YPEL2Q96QA6 119 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 ABHD14AQ9BUJ0 271 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 MRPL20Q9BYC9 149 aaKnown RBP9.58□□□□□ -0.88
LIG1-217ENST00000599165 PLGRKTQ9HBL7 147 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 V9GY05 133 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 SAA2-SAA4A0A096LPE2 208 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 A0A0B4J203 849 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 TRAV1-2A0A0B4J238 106 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 IGKV1-6A0A0C4DH72 117 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 TRDV1A0A1B0GX56 115 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 SAA2P0DJI9 122 aaPredicted RBP9.57□□□□□ -0.88
LIG1-217ENST00000599165 IL3RAP26951 378 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 GPR12P47775 334 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 OR3A3P47888 321 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 MOGAT2Q3SYC2 334 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 HES5Q5TA89 166 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 UBE2UQ5VVX9 321 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 ETV3LQ6ZN32 361 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 WFDC9Q8NEX5 89 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 OR4F17Q8NGA8 305 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 OR4F4Q96R69 305 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 S1PR3Q99500 378 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 NABP2Q9BQ15 211 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 HSPB9Q9BQS6 159 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 PECRQ9BY49 303 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 ABCG5Q9H222 651 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 LIN7CQ9NUP9 197 aaKnown RBP9.57□□□□□ -0.88
LIG1-217ENST00000599165 KCNIP1Q9NZI2 227 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 BLOC1S6Q9UL45 172 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 HSF4Q9ULV5 492 aa9.57□□□□□ -0.88
LIG1-217ENST00000599165 TCRBV4S1A1TA0A5B7 111 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 PSMB11A5LHX3 300 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 ST8SIA5O15466 376 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 TXNL1O43396 289 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 PROP1O75360 226 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 MOSP00540 346 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 PRB2P02812 416 aaPredicted RBP9.56□□□□□ -0.88
LIG1-217ENST00000599165 CNTFRP26992 372 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 VEGFCP49767 419 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 CFHR3Q02985 330 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 SLC35E3Q7Z769 313 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 STPG2Q8N412 459 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 GALMQ96C23 342 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 AGMATQ9BSE5 352 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 Q9N2K0 584 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 RAB9BQ9NP90 201 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 PLEKHJ1Q9NW61 149 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 OR1A1Q9P1Q5 309 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 STEAP1Q9UHE8 339 aa9.56□□□□□ -0.88
LIG1-217ENST00000599165 TSSC4Q9Y5U2 329 aaPredicted RBP9.56□□□□□ -0.88
LIG1-217ENST00000599165 IFITM5A6NNB3 132 aa9.55□□□□□ -0.88
LIG1-217ENST00000599165 SERPINE3A8MV23 424 aa9.55□□□□□ -0.88
LIG1-217ENST00000599165 RAB27BO00194 218 aa9.55□□□□□ -0.88
LIG1-217ENST00000599165 MRPS14O60783 128 aaKnown RBP9.55□□□□□ -0.88
LIG1-217ENST00000599165 SCTP09683 121 aa9.55□□□□□ -0.88
LIG1-217ENST00000599165 SNRPBP14678 240 aaKnown RBP9.55□□□□□ -0.88
LIG1-217ENST00000599165 HLA-DRB3P79483 266 aa9.55□□□□□ -0.88
LIG1-217ENST00000599165 C22orf42Q6IC83 251 aa9.55□□□□□ -0.88
LIG1-217ENST00000599165 OR4X2Q8NGF9 303 aa9.55□□□□□ -0.88
LIG1-217ENST00000599165 IL1F10Q8WWZ1 152 aa9.55□□□□□ -0.88
LIG1-217ENST00000599165 URM1Q9BTM9 101 aaKnown RBP9.55□□□□□ -0.88
LIG1-217ENST00000599165 SMIM30A4D0T7 59 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 NCBP2LA6PVI3 153 aaKnown RBP9.54□□□□□ -0.88
LIG1-217ENST00000599165 MFNGO00587 321 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 SLC2A2P11168 524 aaPredicted RBP9.54□□□□□ -0.88
LIG1-217ENST00000599165 GALP22466 123 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 RPL23AP62750 156 aaKnown RBP9.54□□□□□ -0.88
LIG1-217ENST00000599165 RPL39P5Q59GN2 51 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 LCNL1Q6ZST4 164 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 MOB1BQ7L9L4 216 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 OR8H1Q8NGG4 311 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 SETD6Q8TBK2 473 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 CHPT1Q8WUD6 406 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 PHF21AQ96BD5 680 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 ABHD14BQ96IU4 210 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 CHMP1AQ9HD42 196 aaPredicted RBP9.54□□□□□ -0.88
LIG1-217ENST00000599165 C12orf4Q9NQ89 552 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 SLC23A1Q9UHI7 598 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 ZNF107Q9UII5 783 aaPredicted RBP9.54□□□□□ -0.88
LIG1-217ENST00000599165 LRRC42Q9Y546 428 aa9.54□□□□□ -0.88
LIG1-217ENST00000599165 ITGB1BP1O14713 200 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 CT45A6P0DMU7 189 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 CT45A5P0DMU8 189 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 CT45A7P0DMV0 189 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 IGLL1P15814 213 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms