RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 FGF20Q9NP95 211 aaPredicted RBP13.25□□□□□ -0.29
PNKP-210ENST00000597965 OR2S2Q9NQN1 319 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 CNOT2Q9NZN8 540 aaKnown RBP13.25□□□□□ -0.29
PNKP-210ENST00000597965 ZNF581Q9P0T4 197 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 EFCAB10A6NFE3 127 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 SLC31A2O15432 143 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 GPX5O75715 221 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 HLA-DRB1P01911 266 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 HBZP02008 142 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 LIMS3P0CW19 117 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 LIMS4P0CW20 117 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 SLC2A2P11168 524 aaPredicted RBP13.24□□□□□ -0.29
PNKP-210ENST00000597965 MYL12AP19105 171 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 PPIFP30405 207 aaKnown RBP13.24□□□□□ -0.29
PNKP-210ENST00000597965 MAP2K4P45985 399 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 ZNF134P52741 427 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 RAB12Q6IQ22 244 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 GAPTQ8N292 157 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 SVOPQ8N4V2 548 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 CST11Q9H112 138 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 ZMAT4Q9H898 229 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 KIAA1456Q9P272 454 aa13.24□□□□□ -0.29
PNKP-210ENST00000597965 MRPS28Q9Y2Q9 187 aaKnown RBP13.24□□□□□ -0.29
PNKP-210ENST00000597965 TRAV41A0A0B4J266 112 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 OVOL1O14753 267 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 IGLV1-40P01703 118 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 RAB9AP51151 201 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 ACTBP60709 375 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 IRF3Q14653 427 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 Q499Y3 187 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 MORN2Q502X0 79 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 YIF1BQ5BJH7 314 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 CASC10Q5T4H9 136 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 LIN54Q6MZP7 749 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 TCTEX1D1Q8N7M0 179 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 OR10V1Q8NGI7 309 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 OR6Q1Q8NGQ2 317 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 OR4K15Q8NH41 348 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 ABHD14AQ9BUJ0 271 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 ACOT13Q9NPJ3 140 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 BABAM2Q9NXR7 383 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 JPT1Q9UK76 154 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 PEX16Q9Y5Y5 336 aa13.23□□□□□ -0.29
PNKP-210ENST00000597965 NBR2O15453 112 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 OGG1O15527 345 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 SC5DO75845 299 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 IGFBP3P17936 291 aaPredicted RBP13.22□□□□□ -0.29
PNKP-210ENST00000597965 FUT3P21217 361 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 HTD2P86397 168 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 ST3GAL4Q11206 333 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 JAGN1Q8N5M9 183 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 RCHY1Q96PM5 261 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 TAF9BQ9HBM6 251 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 PALMDQ9NP74 551 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 ISYNA1Q9NPH2 558 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 PARP11Q9NR21 331 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 WSB1Q9Y6I7 421 aa13.22□□□□□ -0.29
PNKP-210ENST00000597965 A0A1W2PP11 408 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 ARPC1BO15143 372 aaKnown RBP13.21□□□□□ -0.29
PNKP-210ENST00000597965 ATP6V0E1O15342 81 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 SAP30O75446 220 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 FSTP19883 344 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 CD40LGP29965 261 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 TMEM267Q0VDI3 215 aaPredicted RBP13.21□□□□□ -0.29
PNKP-210ENST00000597965 C5orf64Q2M2E5 130 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 LY6G6FQ5SQ64 297 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 UBE2UQ5VVX9 321 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 AWAT2Q6E213 333 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 PYHIN1Q6K0P9 492 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 GLIPR1L1Q6UWM5 242 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 CLVS1Q8IUQ0 354 aaPredicted RBP13.21□□□□□ -0.29
PNKP-210ENST00000597965 MINDY2Q8NBR6 621 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 OR1L1Q8NH94 360 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 THRSPQ92748 146 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 GHSRQ92847 366 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 KLK15Q9H2R5 256 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 GNB4Q9HAV0 340 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 MBNL3Q9NUK0 354 aaKnown RBP13.21□□□□□ -0.29
PNKP-210ENST00000597965 RSL24D1Q9UHA3 163 aaKnown RBP13.21□□□□□ -0.29
PNKP-210ENST00000597965 RNF150Q9ULK6 438 aa13.21□□□□□ -0.29
PNKP-210ENST00000597965 EXOSC1Q9Y3B2 195 aaKnown RBP13.21□□□□□ -0.29
PNKP-210ENST00000597965 TRBV5-5A0A0J9YX44 114 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 CCDC160A6NGH7 325 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 LINC01619G3V211 115 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 G3V318 75 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 ZNF701M0R085 212 aaPredicted RBP13.2□□□□□ -0.3
PNKP-210ENST00000597965 YPEL1O60688 119 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 OR8U9P0C7N5 309 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 LYL1P12980 280 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 RCC1P18754 421 aaPredicted RBP13.2□□□□□ -0.3
PNKP-210ENST00000597965 ETV1P50549 477 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 KIAA0141Q14154 515 aaPredicted RBP13.2□□□□□ -0.3
PNKP-210ENST00000597965 DOC2BQ14184 412 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 TBCEQ15813 527 aaPredicted RBP13.2□□□□□ -0.3
PNKP-210ENST00000597965 GPR107Q5VW38 600 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 RNLSQ5VYX0 342 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 ZNF660Q6AZW8 331 aaPredicted RBP13.2□□□□□ -0.3
PNKP-210ENST00000597965 FAM53AQ6NSI3 398 aaPredicted RBP13.2□□□□□ -0.3
PNKP-210ENST00000597965 FAM71F2Q6NXP2 309 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 SBSPONQ8IVN8 264 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms