RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NFYBP25208 207 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 ERVFRD-1P60508 538 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 HERV-K104P61576 105 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 HTD2P86397 168 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 HERPUD1Q15011 391 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 FBLN7Q53RD9 439 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 IGSF11Q5DX21 431 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 METTL11BQ5VVY1 283 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 FAAP20Q6NZ36 180 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 HEPN1Q6WQI6 88 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 ZNF782Q6ZMW2 699 aaPredicted RBP9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 ARRDC1Q8N5I2 433 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 LINC01356Q8N9X3 169 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 POC5Q8NA72 575 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 OR10A7Q8NGE5 316 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 OR4D10Q8NGI6 311 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 PRRT1Q99946 306 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 TINAGL1Q9GZM7 467 aaPredicted RBP9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 OCEL1Q9H607 264 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 SCP2D1Q9UJQ7 156 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 POLR3KQ9Y2Y1 108 aaPredicted RBP9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 TRBV6-7A0A0A0MS04 114 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 IGHV3-43A0A0B4J1X8 118 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 C17orf98A8MV24 154 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 CGB3P0DN86 165 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 CGB7P0DN87 165 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 IGHV3-43DP0DP04 118 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 SRP14P37108 136 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 DVL1P1P54792 670 aaPredicted RBP9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 DLX6P56179 175 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 IFITM3Q01628 133 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 SCGB2B2Q4G0G5 96 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 OVCH2Q7RTZ1 564 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 GLCCI1Q86VQ1 547 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 OR10V1Q8NGI7 309 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 OR52M1Q8NGK5 317 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 OR56B4Q8NH76 319 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 ENKURQ8TC29 256 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 METTL8Q9H825 291 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 LINC00574Q9H8X3 128 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 OR1A1Q9P1Q5 309 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 TBC1D24Q9ULP9 559 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 KPTNQ9Y664 436 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 SESN1Q9Y6P5 492 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 TENM3Q9P273 2699 aa9.86□□□□□ -0.83
SHKBP1-213ENST00000597325 IGKV1-6A0A0C4DH72 117 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 FAM172BPA6NC97 362 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 PLA2G10O15496 165 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 IGHV1-8P0DP01 117 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 NFYAP23511 347 aaPredicted RBP9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 FCGR2CP31995 323 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 PPP1CCP36873 323 aaKnown RBP9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 CEACAM6P40199 344 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 ARF6P62330 175 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 PAX2Q02962 417 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 GNMTQ14749 295 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 RGS21Q2M5E4 152 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 DCAF12L2Q5VW00 463 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 IDO2Q6ZQW0 420 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 C5orf24Q7Z6I8 188 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 H1FOOQ8IZA3 346 aaPredicted RBP9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 OR52L2PQ8NGH6 319 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 OR51S1Q8NGJ8 323 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 OR6F1Q8NGZ6 308 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 EDARADDQ8WWZ3 215 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 SLC6A7Q99884 636 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 ZNF2Q9BSG1 426 aaPredicted RBP9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 SUCNR1Q9BXA5 334 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 C11orf54Q9H0W9 315 aaPredicted RBP9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 GFOD1Q9NXC2 390 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 RDH8Q9NYR8 311 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 RBM7Q9Y580 266 aaKnown RBP9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 INSIG2Q9Y5U4 225 aa9.85□□□□□ -0.83
SHKBP1-213ENST00000597325 FAM240BA0A1B0GVZ2 78 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 TOX4O94842 621 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 AADACP22760 399 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 GATA3P23771 443 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 ECI1P42126 302 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 GNG10P50151 68 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 FXYD4P59646 89 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 HILS1P60008 231 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 OR2AK2Q8NG84 335 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 DACT3Q96B18 629 aaPredicted RBP9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 TMEM186Q96B77 213 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 TMEM133Q9H2Q1 129 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 DPAGT1Q9H3H5 408 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 MMP26Q9NRE1 261 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 HIF1ANQ9NWT6 349 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 SLC2A8Q9NY64 477 aa9.84□□□□□ -0.83
SHKBP1-213ENST00000597325 COL7A1Q02388 2944 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 DSCAML1Q8TD84 2053 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 YPEL1O60688 119 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 MMP23AO75900 390 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 PTTG1O95997 202 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 PPYP01298 95 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 PGAM2P15259 253 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 COX7A1P24310 79 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 RAB7AP51149 207 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 LUMP51884 338 aaPredicted RBP9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 LOXL3P58215 753 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms