RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 BEST4Q8NFU0 473 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 OR10J5Q8NHC4 309 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 RPEQ96AT9 228 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 ABHD14AQ9BUJ0 271 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 MEGF9Q9H1U4 602 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 OR1A1Q9P1Q5 309 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 ANXA10Q9UJ72 324 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 C2CD3Q4AC94 2353 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 IGKV1D-8A0A087WSZ0 117 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 TRBV6-7A0A0A0MS04 114 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 MEIS3P1A6NDR6 274 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 OOSP1A8MZH6 123 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 SLC31A2O15432 143 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 CTXN2P0C2S0 81 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 S100A5P33763 92 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 CEACAM6P40199 344 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 ARHGDIBP52566 201 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 ARPC4P59998 168 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 AANATQ16613 207 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 IGSF11Q5DX21 431 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 CT45A1Q5HYN5 189 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 TPTE2P1Q5T6R2 138 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 CCDC144NLQ6NUI1 221 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 OR2AK2Q8NG84 335 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 CT45A3Q8NHU0 189 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 GPX8Q8TED1 209 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 SSMEM1Q8WWF3 244 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 EDARADDQ8WWZ3 215 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 TOMM40LQ969M1 308 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 GINS4Q9BRT9 223 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 DPAGT1Q9H3H5 408 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 ANAPC10Q9UM13 185 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 HILPDAQ9Y5L2 63 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 JMJD1CQ15652 2540 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 CUBNO60494 3623 aa11.62□□□□□ -0.55
VRK3-213ENST00000597215 BTBD17A6NE02 478 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 DNAJC9-AS1A6NH13 148 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 LY6LH3BQJ8 138 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 ITGB1BP1O14713 200 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 HOXA3O43365 443 aaPredicted RBP11.61□□□□□ -0.55
VRK3-213ENST00000597215 TNFSF8P32971 234 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 RAB7AP51149 207 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 ZNF134P52741 427 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 MRPS10P82664 201 aaKnown RBP11.61□□□□□ -0.55
VRK3-213ENST00000597215 IL18Q14116 193 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 LRRC75BQ2VPJ9 315 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 PYHIN1Q6K0P9 492 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 PRIMA1Q86XR5 153 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 DYNAPQ8N1N2 210 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 TMEM86BQ8N661 226 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 TOLLIPQ9H0E2 274 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 ESM1Q9NQ30 184 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 RDH8Q9NYR8 311 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 POMT1Q9Y6A1 747 aa11.61□□□□□ -0.55
VRK3-213ENST00000597215 VGLL3A8MV65 326 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 VENTXO95231 258 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 FCER2P06734 321 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 PAX6P26367 422 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 IER3P46695 156 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 ZNF137PP52743 207 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 PLA1AQ53H76 456 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 LYG1Q8N1E2 194 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 ZDHHC22Q8N966 263 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 OR5R1Q8NH85 324 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 SNAPC3Q92966 411 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 ABHD1Q96SE0 405 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 SSX3Q99909 188 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 PARP12Q9H0J9 701 aaKnown RBP11.6□□□□□ -0.55
VRK3-213ENST00000597215 ABCB10Q9NRK6 738 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 NECAP2Q9NVZ3 263 aa11.6□□□□□ -0.55
VRK3-213ENST00000597215 FABP12A6NFH5 140 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 CLDN34H7C241 214 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 HSD17B6O14756 317 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 CTDSPLO15194 276 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 ST8SIA5O15466 376 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 IGHV4-59P01825 116 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 GAPDHP04406 335 aaKnown RBP11.59□□□□□ -0.55
VRK3-213ENST00000597215 NAT1P18440 290 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 RCVRNP35243 200 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 TAS2R46P59540 309 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 UBA52P62987 128 aaKnown RBP11.59□□□□□ -0.55
VRK3-213ENST00000597215 ZNF816Q0VGE8 651 aaPredicted RBP11.59□□□□□ -0.55
VRK3-213ENST00000597215 SLC9A3R2Q15599 337 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 RNASE12Q5GAN4 147 aaKnown RBP11.59□□□□□ -0.55
VRK3-213ENST00000597215 H1FOOQ8IZA3 346 aaPredicted RBP11.59□□□□□ -0.55
VRK3-213ENST00000597215 OR8H3Q8N146 312 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 OR5AP2Q8NGF4 316 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 FAM216AQ8WUB2 273 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 FCAMRQ8WWV6 532 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 DUX5Q96PT3 197 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 C11orf54Q9H0W9 315 aaPredicted RBP11.59□□□□□ -0.55
VRK3-213ENST00000597215 IFI27L2Q9H2X8 130 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 GHITMQ9H3K2 345 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 PIPOXQ9P0Z9 390 aa11.59□□□□□ -0.55
VRK3-213ENST00000597215 H3BUX3 64 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 GABARAPH6UMI1 98 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 TRIM77I1YAP6 450 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 RAB29O14966 203 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 TXNL1O43396 289 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 BRS3P32247 399 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms