RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 OR10K2Q6IF99 312 aa12.47□□□□□ -0.41
LIM2-202ENST00000596399 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
LIM2-202ENST00000596399 DCUN1D4Q92564 292 aa12.47□□□□□ -0.41
LIM2-202ENST00000596399 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
LIM2-202ENST00000596399 ZNF580Q9UK33 172 aa12.47□□□□□ -0.41
LIM2-202ENST00000596399 VSIG4Q9Y279 399 aa12.47□□□□□ -0.41
LIM2-202ENST00000596399 SAA2-SAA4A0A096LPE2 208 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 TRAV41A0A0B4J266 112 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 NBR2O15453 112 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 SOX15O60248 233 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 PDCD6O75340 191 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 HLA-DRB1P01911 266 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 OR8U8P0C7N1 319 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 SAA2P0DJI9 122 aaPredicted RBP12.46□□□□□ -0.41
LIM2-202ENST00000596399 OR5H8P0DN80 308 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 SLURP1P55000 103 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 C5orf64Q2M2E5 130 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 TMEM30BQ3MIR4 351 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 C6orf141Q5SZD1 244 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 TRAT1Q6PIZ9 186 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 ZNF833PQ6ZTB9 187 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 OVCH2Q7RTZ1 564 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 SBSPONQ8IVN8 264 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 DLX4Q92988 240 aaPredicted RBP12.46□□□□□ -0.41
LIM2-202ENST00000596399 SULT4A1Q9BR01 284 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 KCNK15Q9H427 330 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 RAB9BQ9NP90 201 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 CHCHD3Q9NX63 227 aaKnown RBP12.46□□□□□ -0.41
LIM2-202ENST00000596399 KCNIP1Q9NZI2 227 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 A3GALT2U3KPV4 340 aa12.46□□□□□ -0.41
LIM2-202ENST00000596399 IRGMA1A4Y4 181 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 FAM90A10PA6NDY2 464 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 FAM90A7PA6NKC0 464 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 FAM90A23PA8MXZ1 464 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 CELP19835 753 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 RUNX1Q01196 453 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 ECSCRQ19T08 205 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 LIN54Q6MZP7 749 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 C10orf67Q8IYJ2 551 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 MINDY2Q8NBR6 621 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 FAAP24Q9BTP7 215 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 PARP12Q9H0J9 701 aaKnown RBP12.45□□□□□ -0.42
LIM2-202ENST00000596399 ISYNA1Q9NPH2 558 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 JPT1Q9UK76 154 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 SMAD5-AS1Q9Y6J3 95 aa12.45□□□□□ -0.42
LIM2-202ENST00000596399 FCN1O00602 326 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 ST8SIA5O15466 376 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 YPEL1O60688 119 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 CA11O75493 328 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 CHATP28329 748 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 HTD2P86397 168 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 RPL39P5Q59GN2 51 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 C19orf54Q5BKX5 351 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 FAM27D1Q5T7N8 215 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 FAM131AQ6UXB0 335 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 GLDNQ6ZMI3 551 aaPredicted RBP12.44□□□□□ -0.42
LIM2-202ENST00000596399 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 CDH26Q8IXH8 852 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 NPBQ8NG41 125 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 IL1F10Q8WWZ1 152 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 YPEL2Q96QA6 119 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 CHCHD6Q9BRQ6 235 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 IFI27L2Q9H2X8 130 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 FBXL15Q9H469 300 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 SACSQ9NZJ4 4579 aa12.44□□□□□ -0.42
LIM2-202ENST00000596399 A0A1W2PN81 502 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 OVOL1O14753 267 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 SAP30O75446 220 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 NDUFA3O95167 84 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 GLAP06280 429 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 GNAO1P09471 354 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 SPNP16150 400 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 CHRNA7P36544 502 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 HMGN3Q15651 99 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 OR2AK2Q8NG84 335 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 NICN1Q9BSH3 213 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 GAR1Q9NY12 217 aaKnown RBP12.43□□□□□ -0.42
LIM2-202ENST00000596399 GAB2Q9UQC2 676 aa12.43□□□□□ -0.42
LIM2-202ENST00000596399 TENM2Q9NT68 2774 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 EPPK1P58107 5090 aaKnown RBP12.42□□□□□ -0.42
LIM2-202ENST00000596399 IGHV4OR15-8A0A075B7B6 117 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 A0A087WW49 117 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 C3orf84H3BNL1 204 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 IGHV3-11P01762 117 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 CT45A6P0DMU7 189 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 CT45A5P0DMU8 189 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 CT45A7P0DMV0 189 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 EGR2P11161 476 aaPredicted RBP12.42□□□□□ -0.42
LIM2-202ENST00000596399 HTR2CP28335 458 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 INSL3P51460 131 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 CX3CL1P78423 397 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 GABPB1Q06547 395 aaPredicted RBP12.42□□□□□ -0.42
LIM2-202ENST00000596399 MED21Q13503 144 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 AHSA2Q719I0 299 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 HAPLN4Q86UW8 402 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 ZNF429Q86V71 674 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 GALMQ96C23 342 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 ABHD14BQ96IU4 210 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 RCHY1Q96PM5 261 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 CLCC1Q96S66 551 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms