RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 DCSTAMPQ9H295 470 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 SLC23A1Q9UHI7 598 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 SIGLEC9Q9Y336 463 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 IGHV1-3A0A0C4DH29 117 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 SNRNP70P08621 437 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 GSTP1P09211 210 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 BRS3P32247 399 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 TALDO1P37837 337 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 MNDAP41218 407 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 OR3A3P47888 321 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 RAB7AP51149 207 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 ZNF816Q0VGE8 651 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 SPCS2Q15005 226 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 IGSF11Q5DX21 431 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 UBE2NLQ5JXB2 153 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 HACD4Q5VWC8 232 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 CCDC144NLQ6NUI1 221 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 MOB3BQ86TA1 216 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 LINC01006Q8NI28 216 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 RTN4IP1Q8WWV3 396 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 IFI27L2Q9H2X8 130 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 MGAT4AQ9UM21 535 aa11.04□□□□□ -0.64
SHKBP1-207ENST00000595631 TENM1Q9UKZ4 2725 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 SH2D7A6NKC9 451 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 ZNF736B4DX44 427 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 FABP7O15540 132 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 HSPA12AO43301 675 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 SCGNO76038 276 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 RGS11O94810 467 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 GAPDHP04406 335 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 EIF4EP06730 217 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 IL3RAP26951 378 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 CEACAM6P40199 344 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 RPL5P46777 297 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 ARHGDIBP52566 201 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 ZNF137PP52743 207 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 GNG2P59768 71 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 SRSF4Q08170 494 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 HABP2Q14520 560 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 STEAP3Q658P3 488 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 LIAT1Q6ZQX7 453 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 Q6ZS46 218 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 OR8H3Q8N146 312 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 C3orf56Q8N813 242 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 OR2AK2Q8NG84 335 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 PHF21AQ96BD5 680 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 SLC25A33Q9BSK2 321 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 ST6GALNAC5Q9BVH7 336 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 COMMD3Q9UBI1 195 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 PITPNC1Q9UKF7 332 aa11.03□□□□□ -0.64
SHKBP1-207ENST00000595631 SAA2-SAA4A0A096LPE2 208 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 CLPSL1A2RUU4 121 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 FAM90A9PA6NNJ1 464 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 POM121CA8CG34 1229 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 HAX1O00165 279 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 BET1O15155 118 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 TMEM127O75204 238 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 TSPAN9O75954 239 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 IGKV1D-33P01593 117 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 IGKV1-33P01594 117 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 FCER2P06734 321 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 SAA2P0DJI9 122 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 ZBTB25P24278 435 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 RORCP51449 518 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 KRTAP10-3P60369 221 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 BLCAPP62952 87 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 HNF4GQ14541 408 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 ARL6IP1Q15041 203 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 LY6G6FQ5SQ64 297 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 TGIF2LXQ8IUE1 241 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 OR4A4PQ8NGN8 299 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 OR4C13Q8NGP0 309 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 ABHD14BQ96IU4 210 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 MRPL20Q9BYC9 149 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 C11orf54Q9H0W9 315 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 ABCG5Q9H222 651 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 C16orf95Q9H693 158 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 ZNF702PQ9H963 129 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 BEX1Q9HBH7 125 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 RAB18Q9NP72 206 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 DIABLOQ9NR28 239 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 RDH8Q9NYR8 311 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 RNF150Q9ULK6 438 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 RNF114Q9Y508 228 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 MMP24Q9Y5R2 645 aa11.02□□□□□ -0.65
SHKBP1-207ENST00000595631 MEIS3P1A6NDR6 274 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 HPGDSO60760 199 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 TMEM11P17152 192 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 DTYMKP23919 212 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 KIR2DS4P43632 304 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 HES1Q14469 280 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 KIR2DS1Q14954 304 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 PNLIPRP3Q17RR3 467 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 TMEM95Q3KNT9 176 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 RPL39P5Q59GN2 51 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 WFDC12Q8WWY7 111 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 KCTD12Q96CX2 325 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 S100A16Q96FQ6 103 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 CABLES2Q9BTV7 478 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms