RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PNLIPRP3Q17RR3 467 aa18.48■□□□□ 0.55
LSM4-204ENST00000594828 LY6G6FQ5SQ64 297 aa18.48■□□□□ 0.55
LSM4-204ENST00000594828 TMEM91Q6ZNR0 172 aa18.48■□□□□ 0.55
LSM4-204ENST00000594828 C18orf65Q6ZTR6 163 aa18.48■□□□□ 0.55
LSM4-204ENST00000594828 C8orf86Q6ZUL3 223 aa18.48■□□□□ 0.55
LSM4-204ENST00000594828 MRPL41Q8IXM3 137 aaKnown RBP18.48■□□□□ 0.55
LSM4-204ENST00000594828 FAM71E2Q8N5Q1 922 aa18.48■□□□□ 0.55
LSM4-204ENST00000594828 PLEKHJ1Q9NW61 149 aa18.48■□□□□ 0.55
LSM4-204ENST00000594828 ABRACLQ9P1F3 81 aa18.48■□□□□ 0.55
LSM4-204ENST00000594828 SOX6P35712 828 aa18.47■□□□□ 0.55
LSM4-204ENST00000594828 RPS25P62851 125 aaKnown RBP18.47■□□□□ 0.55
LSM4-204ENST00000594828 HMGN3Q15651 99 aa18.47■□□□□ 0.55
LSM4-204ENST00000594828 ETV3LQ6ZN32 361 aa18.47■□□□□ 0.55
LSM4-204ENST00000594828 ODF3L1Q8IXM7 274 aa18.47■□□□□ 0.55
LSM4-204ENST00000594828 KLHL30-AS1Q8NEE0 82 aa18.47■□□□□ 0.55
LSM4-204ENST00000594828 VCX3BQ9H321 246 aa18.47■□□□□ 0.55
LSM4-204ENST00000594828 PLGRKTQ9HBL7 147 aa18.47■□□□□ 0.55
LSM4-204ENST00000594828 CHMP1AQ9HD42 196 aaPredicted RBP18.47■□□□□ 0.55
LSM4-204ENST00000594828 RRP9O43818 475 aaKnown RBP18.46■□□□□ 0.55
LSM4-204ENST00000594828 ARL6IP5O75915 188 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 ARSBP15848 533 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 CRHBPP24387 322 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 PSMA1P25786 263 aaKnown RBP18.46■□□□□ 0.55
LSM4-204ENST00000594828 MYCNOSP40205 109 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 MLLT11Q13015 90 aaPredicted RBP18.46■□□□□ 0.55
LSM4-204ENST00000594828 P2RY14Q15391 338 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 PRSS48Q7RTY5 328 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 ZNF695Q8IW36 515 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 OR2AK2Q8NG84 335 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 IL1F10Q8WWZ1 152 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 HSPB9Q9BQS6 159 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 URM1Q9BTM9 101 aaKnown RBP18.46■□□□□ 0.55
LSM4-204ENST00000594828 STEAP1Q9UHE8 339 aa18.46■□□□□ 0.55
LSM4-204ENST00000594828 AK6Q9Y3D8 172 aaKnown RBP18.46■□□□□ 0.55
LSM4-204ENST00000594828 NAPSAO96009 420 aa18.45■□□□□ 0.54
LSM4-204ENST00000594828 CPEP16870 476 aa18.45■□□□□ 0.54
LSM4-204ENST00000594828 SVOPQ8N4V2 548 aa18.45■□□□□ 0.54
LSM4-204ENST00000594828 SETD6Q8TBK2 473 aa18.45■□□□□ 0.54
LSM4-204ENST00000594828 GFI1Q99684 422 aa18.45■□□□□ 0.54
LSM4-204ENST00000594828 MRPL20Q9BYC9 149 aaKnown RBP18.45■□□□□ 0.54
LSM4-204ENST00000594828 LPAR5Q9H1C0 372 aa18.45■□□□□ 0.54
LSM4-204ENST00000594828 RIMS4Q9H426 269 aaPredicted RBP18.45■□□□□ 0.54
LSM4-204ENST00000594828 A0A0A6YYD4 124 aa18.44■□□□□ 0.54
LSM4-204ENST00000594828 SLC17A2O00624 439 aa18.44■□□□□ 0.54
LSM4-204ENST00000594828 OR3A3P47888 321 aa18.44■□□□□ 0.54
LSM4-204ENST00000594828 MMDQ15546 238 aa18.44■□□□□ 0.54
LSM4-204ENST00000594828 CXorf66Q5JRM2 361 aaPredicted RBP18.44■□□□□ 0.54
LSM4-204ENST00000594828 ZNF880Q6PDB4 577 aa18.44■□□□□ 0.54
LSM4-204ENST00000594828 ZNF833PQ6ZTB9 187 aa18.44■□□□□ 0.54
LSM4-204ENST00000594828 MGLLQ99685 303 aa18.44■□□□□ 0.54
LSM4-204ENST00000594828 NABP2Q9BQ15 211 aa18.44■□□□□ 0.54
LSM4-204ENST00000594828 SOCS1O15524 211 aa18.43■□□□□ 0.54
LSM4-204ENST00000594828 RPLP1P05386 114 aaKnown RBP18.43■□□□□ 0.54
LSM4-204ENST00000594828 SLC2A2P11168 524 aaPredicted RBP18.43■□□□□ 0.54
LSM4-204ENST00000594828 VDAC1P21796 283 aa18.43■□□□□ 0.54
LSM4-204ENST00000594828 MAP2K4P45985 399 aa18.43■□□□□ 0.54
LSM4-204ENST00000594828 ACTBP60709 375 aa18.43■□□□□ 0.54
LSM4-204ENST00000594828 FOXE3Q13461 319 aa18.43■□□□□ 0.54
LSM4-204ENST00000594828 RAB11BQ15907 218 aa18.43■□□□□ 0.54
LSM4-204ENST00000594828 MOB1BQ7L9L4 216 aa18.43■□□□□ 0.54
LSM4-204ENST00000594828 FAM89BQ8N5H3 189 aa18.43■□□□□ 0.54
LSM4-204ENST00000594828 GPR61Q9BZJ8 451 aa18.43■□□□□ 0.54
LSM4-204ENST00000594828 ZNF107Q9UII5 783 aaPredicted RBP18.43■□□□□ 0.54
LSM4-204ENST00000594828 SAA2-SAA4A0A096LPE2 208 aa18.42■□□□□ 0.54
LSM4-204ENST00000594828 ELANEP08246 267 aa18.42■□□□□ 0.54
LSM4-204ENST00000594828 SAA2P0DJI9 122 aaPredicted RBP18.42■□□□□ 0.54
LSM4-204ENST00000594828 CALRP27797 417 aaKnown RBP18.42■□□□□ 0.54
LSM4-204ENST00000594828 FABP5Q01469 135 aa18.42■□□□□ 0.54
LSM4-204ENST00000594828 IZUMO2Q6UXV1 221 aa18.42■□□□□ 0.54
LSM4-204ENST00000594828 LCNL1Q6ZST4 164 aa18.42■□□□□ 0.54
LSM4-204ENST00000594828 RITA1Q96K30 269 aa18.42■□□□□ 0.54
LSM4-204ENST00000594828 P2RX4Q99571 388 aa18.42■□□□□ 0.54
LSM4-204ENST00000594828 ZNF251Q9BRH9 671 aa18.42■□□□□ 0.54
LSM4-204ENST00000594828 MCRIP2Q9BUT9 160 aaKnown RBP18.42■□□□□ 0.54
LSM4-204ENST00000594828 PIPOXQ9P0Z9 390 aa18.42■□□□□ 0.54
LSM4-204ENST00000594828 AK3Q9UIJ7 227 aa18.42■□□□□ 0.54
LSM4-204ENST00000594828 TRBV6-6A0A0A6YYG2 114 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 ST8SIA5O15466 376 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 IGF1P05019 195 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 HSPA13P48723 471 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 KRTAP10-11P60412 298 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 CFHR3Q02985 330 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 RNF152Q8N8N0 203 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 DPF1Q92782 380 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 IFI27L2Q9H2X8 130 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 ACOT13Q9NPJ3 140 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 HSF4Q9ULV5 492 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 DNAH3Q8TD57 4116 aa18.41■□□□□ 0.54
LSM4-204ENST00000594828 CCL24O00175 119 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 RAB29O14966 203 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 IGHG4P01861 327 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 HOXD3P31249 432 aaPredicted RBP18.4■□□□□ 0.54
LSM4-204ENST00000594828 RANBP1P43487 201 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 CDX1P47902 265 aaPredicted RBP18.4■□□□□ 0.54
LSM4-204ENST00000594828 VEGFCP49767 419 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 PSMD7P51665 324 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 CLDN12P56749 244 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 EGFEM1PQ0D2K5 195 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 FAM71F2Q6NXP2 309 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 RAX2Q96IS3 184 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms