RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 MBNL3Q9NUK0 354 aaKnown RBP11.54□□□□□ -0.56
PNKP-202ENST00000593706 RAB26Q9ULW5 256 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 TMEM14DPA8MWL7 114 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 MCRIP1C9JLW8 97 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 C3orf84H3BNL1 204 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 TXNL1O43396 289 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 PDCD6O75340 191 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 CA11O75493 328 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 FUT3P21217 361 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 CHATP28329 748 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 SOX6P35712 828 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 RPS27AP62979 156 aaKnown RBP11.53□□□□□ -0.56
PNKP-202ENST00000593706 ZNF260Q3ZCT1 412 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 OR10K2Q6IF99 312 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 LINC00311Q8N616 119 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 RNF152Q8N8N0 203 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 CCDC107Q8WV48 283 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 MGLLQ99685 303 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 TM2D1Q9BX74 207 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 CST11Q9H112 138 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 GFOD1Q9NXC2 390 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 ETAA1Q9NY74 926 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 ZNF256Q9Y2P7 627 aaPredicted RBP11.53□□□□□ -0.56
PNKP-202ENST00000593706 PEX16Q9Y5Y5 336 aa11.53□□□□□ -0.56
PNKP-202ENST00000593706 A0A0A6YYD4 124 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 IGHG4P01861 327 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 HSMCR30P0CW71 290 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 RCC1P18754 421 aaPredicted RBP11.52□□□□□ -0.57
PNKP-202ENST00000593706 PSMA1P25786 263 aaKnown RBP11.52□□□□□ -0.57
PNKP-202ENST00000593706 CD1BP29016 333 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 FABP5Q01469 135 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 SSX1Q16384 188 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 Q3ZCU0 254 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 SYT6Q5T7P8 510 aaPredicted RBP11.52□□□□□ -0.57
PNKP-202ENST00000593706 GLT8D1Q68CQ7 371 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 OR8H1Q8NGG4 311 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 OR6M1Q8NGM8 313 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 MRPL30Q8TCC3 161 aaKnown RBP11.52□□□□□ -0.57
PNKP-202ENST00000593706 ST6GALNAC6Q969X2 333 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 HSPB9Q9BQS6 159 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 RYR2Q92736 4967 aa11.52□□□□□ -0.57
PNKP-202ENST00000593706 ZNF736B4DX44 427 aaPredicted RBP11.51□□□□□ -0.57
PNKP-202ENST00000593706 BPNT1O95861 308 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 HBZP02008 142 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 OR5H8P0DN80 308 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 SLC2A2P11168 524 aaPredicted RBP11.51□□□□□ -0.57
PNKP-202ENST00000593706 HTR2CP28335 458 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 ZNF137PP52743 207 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 FHL3Q13643 280 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 TRAM1Q15629 374 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 TMEM30BQ3MIR4 351 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 ZNF367Q7RTV3 350 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 ZNF554Q86TJ5 538 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 PRR18Q8N4B5 295 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 FAM71E2Q8N5Q1 922 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 OR11H1Q8NG94 326 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 OR4K15Q8NH41 348 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 SULT4A1Q9BR01 284 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 CCDC90BQ9GZT6 254 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 ACOT13Q9NPJ3 140 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 PLSCR3Q9NRY6 295 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 GNG12Q9UBI6 72 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 SCOCQ9UIL1 159 aa11.51□□□□□ -0.57
PNKP-202ENST00000593706 LYSTQ99698 3801 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 FOXI3A8MTJ6 420 aaPredicted RBP11.5□□□□□ -0.57
PNKP-202ENST00000593706 SLC17A2O00624 439 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 SLC31A2O15432 143 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 SPINT2O43291 252 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 OR8U8P0C7N1 319 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 PSMB8P28062 276 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 ZNF134P52741 427 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 GABARAPL2P60520 117 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 CFHR3Q02985 330 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 C6orf183Q5T699 404 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 TMEM65Q6PI78 240 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 CD200R1LQ6Q8B3 271 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 SLC25A48Q6ZT89 311 aaKnown RBP11.5□□□□□ -0.57
PNKP-202ENST00000593706 OR1L1Q8NH94 360 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 KCNG3Q8TAE7 436 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 KCTD7Q96MP8 289 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 NICN1Q9BSH3 213 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 TMEM59Q9BXS4 323 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 RAB9BQ9NP90 201 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 NDUFB11Q9NX14 153 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 ZNF107Q9UII5 783 aaPredicted RBP11.5□□□□□ -0.57
PNKP-202ENST00000593706 TRAPPC2LQ9UL33 140 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 BLOC1S6Q9UL45 172 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 SMAD5-AS1Q9Y6J3 95 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 SACSQ9NZJ4 4579 aa11.5□□□□□ -0.57
PNKP-202ENST00000593706 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 CSMD3Q7Z407 3707 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 UBE2QL1A1L167 161 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 ARL6IP5O75915 188 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 NAPSAO96009 420 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 INSL3P51460 131 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 F2RL1P55085 397 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 MMDQ15546 238 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 CT45A1Q5HYN5 189 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 TRAT1Q6PIZ9 186 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 C6orf201Q7Z4U5 140 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms