RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TMEM30CPA0ZSE6 113 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 UBE2QL1A1L167 161 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 LINC01548A6NM66 108 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 HSD17B6O14756 317 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 MT-ND4P03905 459 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 CD1BP29016 333 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 HOXD3P31249 432 aaPredicted RBP8.18□□□□□ -1.1
VPS4B-207ENST00000591519 OR10A3P58181 314 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 PNLIPRP3Q17RR3 467 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 KCTD21Q4G0X4 260 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 C1orf100Q5SVJ3 147 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 RAB12Q6IQ22 244 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 TEX38Q6PEX7 206 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 C18orf65Q6ZTR6 163 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 ZNF695Q8IW36 515 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 RNF152Q8N8N0 203 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 Q8N9W7 124 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 TSPAN14Q8NG11 270 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 OR6M1Q8NGM8 313 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 OR2T10Q8NGZ9 312 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 DPF1Q92782 380 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 ARL11Q969Q4 196 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 B9D2Q9BPU9 175 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 GON7Q9BXV9 100 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 CST11Q9H112 138 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 OR51E2Q9H255 320 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 LIN7CQ9NUP9 197 aaKnown RBP8.18□□□□□ -1.1
VPS4B-207ENST00000591519 PEX16Q9Y5Y5 336 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 A0A0B4J203 849 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 LOC100506127A0A0U1RQW1 187 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 A0A1W2PPE3 182 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 MCRIP1C9JLW8 97 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 AP4M1O00189 453 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 PDCD5O14737 125 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 SLC22A1O15245 554 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 TNFAIP8O95379 198 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 UBBP0CG47 229 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 GADD45AP24522 165 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 GPR12P47775 334 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 CDX1P47902 265 aaPredicted RBP8.17□□□□□ -1.1
VPS4B-207ENST00000591519 GNG10P50151 68 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 ZNF137PP52743 207 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 UNC119Q13432 240 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 DCTN2Q13561 401 aaKnown RBP8.17□□□□□ -1.1
VPS4B-207ENST00000591519 KIR2DS1Q14954 304 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 STEAP3Q658P3 488 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 ZNF497Q6ZNH5 498 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 MOB3BQ86TA1 216 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 GAPTQ8N292 157 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 OR8H1Q8NGG4 311 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 OR4K15Q8NH41 348 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 RTN4IP1Q8WWV3 396 aaPredicted RBP8.17□□□□□ -1.1
VPS4B-207ENST00000591519 MRPS24Q96EL2 167 aaKnown RBP8.17□□□□□ -1.1
VPS4B-207ENST00000591519 Q96M66 194 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 CHCHD6Q9BRQ6 235 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 NICN1Q9BSH3 213 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 TMEM59Q9BXS4 323 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 RNF167Q9H6Y7 350 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 TXNL4BQ9NX01 149 aaKnown RBP8.17□□□□□ -1.1
VPS4B-207ENST00000591519 GFOD1Q9NXC2 390 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 ETAA1Q9NY74 926 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 LINC00527Q9UJ94 153 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 ZNF580Q9UK33 172 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 STUB1Q9UNE7 303 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 SSR3Q9UNL2 185 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 V9GY05 133 aa8.17□□□□□ -1.1
VPS4B-207ENST00000591519 A0A087WXM4 84 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 NCBP2LA6PVI3 153 aaKnown RBP8.16□□□□□ -1.1
VPS4B-207ENST00000591519 AIPO00170 330 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 CCL24O00175 119 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 SDCBPO00560 298 aaPredicted RBP8.16□□□□□ -1.1
VPS4B-207ENST00000591519 SLC17A2O00624 439 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 RAMP3O60896 148 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 PDCD6O75340 191 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 BPNT1O95861 308 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 MOSP00540 346 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 ARSBP15848 533 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 CD36P16671 472 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 RAB3BP20337 219 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 FUT3P21217 361 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 RPS27AP62979 156 aaKnown RBP8.16□□□□□ -1.1
VPS4B-207ENST00000591519 MXD1Q05195 221 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 PLA2G7Q13093 441 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 FOXE3Q13461 319 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 TMEM30BQ3MIR4 351 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 SYT6Q5T7P8 510 aaPredicted RBP8.16□□□□□ -1.1
VPS4B-207ENST00000591519 SIGIRRQ6IA17 410 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 C11orf87Q6NUJ2 197 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 CD200R1LQ6Q8B3 271 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 SLC25A48Q6ZT89 311 aaKnown RBP8.16□□□□□ -1.1
VPS4B-207ENST00000591519 KLHL30-AS1Q8NEE0 82 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 KCNG3Q8TAE7 436 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 RAX2Q96IS3 184 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 NEDD4LQ96PU5 975 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 SPACA1Q9HBV2 294 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.16□□□□□ -1.1
VPS4B-207ENST00000591519 RCC2Q9P258 522 aaKnown RBP8.16□□□□□ -1.1
VPS4B-207ENST00000591519 GHRLQ9UBU3 117 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 TRAPPC2LQ9UL33 140 aa8.16□□□□□ -1.1
VPS4B-207ENST00000591519 NBEAL2Q6ZNJ1 2754 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms