RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 OR13F1Q8NGS4 319 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 CREB3L1Q96BA8 519 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 SLC25A33Q9BSK2 321 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 C12orf4Q9NQ89 552 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 SERTAD4Q9NUC0 356 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 OOSP1A8MZH6 123 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 IGKV1D-33P01593 117 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 IGKV1-33P01594 117 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 GAPDHP04406 335 aaKnown RBP9.19□□□□□ -0.94
VMP1-211ENST00000591315 FCGR3AP08637 254 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 GSTT2P0CG29 244 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 GSTT2BP0CG30 244 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 MNDAP41218 407 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 VBP1P61758 197 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 HTD2P86397 168 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 ZNF816Q0VGE8 651 aaPredicted RBP9.19□□□□□ -0.94
VMP1-211ENST00000591315 CDNFQ49AH0 187 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 CCDC144NLQ6NUI1 221 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 ZNF554Q86TJ5 538 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 C11orf44Q8N8P7 122 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 RTN4IP1Q8WWV3 396 aaPredicted RBP9.19□□□□□ -0.94
VMP1-211ENST00000591315 PTX4Q96A99 478 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 GALMQ96C23 342 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 RBM14Q96PK6 669 aaKnown RBP9.19□□□□□ -0.94
VMP1-211ENST00000591315 ABHD14AQ9BUJ0 271 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 NPFFR1Q9GZQ6 430 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 RIMS4Q9H426 269 aaPredicted RBP9.19□□□□□ -0.94
VMP1-211ENST00000591315 RHBDL2Q9NX52 303 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 ABRACLQ9P1F3 81 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 SLC23A1Q9UHI7 598 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 JPT1Q9UK76 154 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 PITPNC1Q9UKF7 332 aa9.19□□□□□ -0.94
VMP1-211ENST00000591315 A0A1B0GUS0 222 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 METTL21EPA6NDL7 271 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 TMEM235A6NFC5 223 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 TRDCB7Z8K6 153 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 SSX5O60225 188 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 YPEL1O60688 119 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 TFAP2AP05549 437 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 VSIG10L2P0DP72 767 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 PTHLHP12272 177 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 CEACAM6P40199 344 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 ALDH3B2P48448 385 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 SERPINB10P48595 397 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 RAB7AP51149 207 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 ZNF137PP52743 207 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 LINC00205P59089 165 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 ARFRP1Q13795 201 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 HES1Q14469 280 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 TIMM50Q3ZCQ8 353 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 ABCA11PQ4W5N1 156 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 RPL39P5Q59GN2 51 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 IGSF11Q5DX21 431 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 SHISA2Q6UWI4 295 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 LIAT1Q6ZQX7 453 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 MOB1BQ7L9L4 216 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 OR8H3Q8N146 312 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 NUDCD2Q8WVJ2 157 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 ABHD14BQ96IU4 210 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 EAF1Q96JC9 268 aaPredicted RBP9.18□□□□□ -0.94
VMP1-211ENST00000591315 RITA1Q96K30 269 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 YPEL2Q96QA6 119 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 CITED1Q99966 193 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 MRPL20Q9BYC9 149 aaKnown RBP9.18□□□□□ -0.94
VMP1-211ENST00000591315 C11orf54Q9H0W9 315 aaPredicted RBP9.18□□□□□ -0.94
VMP1-211ENST00000591315 IFI27L2Q9H2X8 130 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 RAB18Q9NP72 206 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 RAB9BQ9NP90 201 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 RNF150Q9ULK6 438 aa9.18□□□□□ -0.94
VMP1-211ENST00000591315 NOTCH1P46531 2555 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 SAA2-SAA4A0A096LPE2 208 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 FABP7O15540 132 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 OR2F2O95006 317 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 FCER2P06734 321 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 SAA2P0DJI9 122 aaPredicted RBP9.17□□□□□ -0.94
VMP1-211ENST00000591315 TMEM11P17152 192 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 CTF1Q16619 201 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 TMEM30BQ3MIR4 351 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 ZNF260Q3ZCT1 412 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 Q3ZCU0 254 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 GPR107Q5VW38 600 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 THNSL2Q86YJ6 484 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 TGIF2LXQ8IUE1 241 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 Q8N2B8 174 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 KLHDC1Q8N7A1 406 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 OR2T6Q8NHC8 308 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 ZNF251Q9BRH9 671 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 PRSS22Q9GZN4 317 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 RANBP3Q9H6Z4 567 aaPredicted RBP9.17□□□□□ -0.94
VMP1-211ENST00000591315 NOTCH3Q9UM47 2321 aa9.17□□□□□ -0.94
VMP1-211ENST00000591315 TRAV18A0A075B6X5 111 aa9.16□□□□□ -0.94
VMP1-211ENST00000591315 LINC01548A6NM66 108 aa9.16□□□□□ -0.94
VMP1-211ENST00000591315 BET1O15155 118 aa9.16□□□□□ -0.94
VMP1-211ENST00000591315 HSPA12AO43301 675 aa9.16□□□□□ -0.94
VMP1-211ENST00000591315 LANCL1O43813 399 aa9.16□□□□□ -0.94
VMP1-211ENST00000591315 PROP1O75360 226 aa9.16□□□□□ -0.94
VMP1-211ENST00000591315 LPLP06858 475 aa9.16□□□□□ -0.94
VMP1-211ENST00000591315 FAM106CPP0CH98 169 aa9.16□□□□□ -0.94
VMP1-211ENST00000591315 IL3RAP26951 378 aa9.16□□□□□ -0.94
VMP1-211ENST00000591315 RANBP1P43487 201 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms