RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 TAS2R8Q9NYW2 309 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 TBL2Q9Y4P3 447 aaKnown RBP11.09□□□□□ -0.63
VMP1-210ENST00000589823 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
VMP1-210ENST00000589823 IGLV1-47P01700 117 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 PMP2P02689 132 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 CSF1P09603 554 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 OR5H8P0DN80 308 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 EPHA1P21709 976 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 IL3RAP26951 378 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 HTR1DP28221 377 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 SAA4P35542 130 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 CEACAM3P40198 252 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 TAS2R19P59542 299 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 UTF1Q5T230 341 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 MINOS1Q5TGZ0 78 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 SLC25A48Q6ZT89 311 aaKnown RBP11.08□□□□□ -0.64
VMP1-210ENST00000589823 LINC00311Q8N616 119 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 THAP7Q9BT49 309 aaPredicted RBP11.08□□□□□ -0.64
VMP1-210ENST00000589823 ABHD14AQ9BUJ0 271 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 SRRQ9GZT4 340 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 AKIP1Q9NQ31 210 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 EHFQ9NZC4 300 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 ZNF107Q9UII5 783 aaPredicted RBP11.08□□□□□ -0.64
VMP1-210ENST00000589823 FAM96BQ9Y3D0 163 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 MINOS1-NBL1R4GNA1 71 aa11.08□□□□□ -0.64
VMP1-210ENST00000589823 A0A1W2PPE3 182 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 TBPP20226 339 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 HRH1P35367 487 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 INPP1P49441 399 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 RAB7AP51149 207 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 RNASE10Q5GAN6 216 aaKnown RBP11.07□□□□□ -0.64
VMP1-210ENST00000589823 CT45A1Q5HYN5 189 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 LYSMD2Q8IV50 215 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 MFSD4AQ8N468 514 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 TMEM229BQ8NBD8 167 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 ZNF439Q8NDP4 499 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 OR4P4Q8NGL7 312 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 CT45A3Q8NHU0 189 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 C22orf15Q8WYQ4 148 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 WDR12Q9GZL7 423 aaKnown RBP11.07□□□□□ -0.64
VMP1-210ENST00000589823 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 ZNRD1Q9P1U0 126 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 DPM3Q9P2X0 92 aa11.07□□□□□ -0.64
VMP1-210ENST00000589823 RBMX2Q9Y388 322 aaKnown RBP11.07□□□□□ -0.64
VMP1-210ENST00000589823 RBM7Q9Y580 266 aaKnown RBP11.07□□□□□ -0.64
VMP1-210ENST00000589823 LEUTXA8MZ59 168 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 BUB1B-PAK6H3BSN5 160 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 ITGB1BP1O14713 200 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 SLC31A2O15432 143 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 CRLF1O75462 422 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 CD3DP04234 171 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 IFNA6P05013 189 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 NFYAP23511 347 aaPredicted RBP11.06□□□□□ -0.64
VMP1-210ENST00000589823 RFX2P48378 723 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 ZNF134P52741 427 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 AP3S2P59780 193 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 TSPAN5P62079 268 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 DYRK1AQ13627 763 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 ZNF846Q147U1 533 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 TRIQKQ629K1 86 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 STEAP1BQ6NZ63 245 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 OVCH2Q7RTZ1 564 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 LHFPL4Q7Z7J7 247 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 H1FOOQ8IZA3 346 aaPredicted RBP11.06□□□□□ -0.64
VMP1-210ENST00000589823 LYG1Q8N1E2 194 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 MALSU1Q96EH3 234 aa11.06□□□□□ -0.64
VMP1-210ENST00000589823 C11orf54Q9H0W9 315 aaPredicted RBP11.06□□□□□ -0.64
VMP1-210ENST00000589823 A0A0U1RQK1 487 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 ANKRD20A5PA0PJZ0 165 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 M0QYG6 137 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 ST8SIA5O15466 376 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 LANCL1O43813 399 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 RAB3DO95716 219 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 FBP1P09467 338 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 AKAIN1P0CW23 69 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 FCGR2CP31995 323 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 LUMP51884 338 aaPredicted RBP11.05□□□□□ -0.64
VMP1-210ENST00000589823 MEF2DQ14814 521 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 VAX1Q5SQQ9 334 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 TPTE2P1Q5T6R2 138 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 TMEM17Q86X19 198 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 BCL6BQ8N143 479 aaPredicted RBP11.05□□□□□ -0.64
VMP1-210ENST00000589823 TOMM5Q8N4H5 51 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 OR6F1Q8NGZ6 308 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 FAM216AQ8WUB2 273 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 GIMAP1Q8WWP7 306 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 TOMM40LQ969M1 308 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 RPEQ96AT9 228 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 PARP12Q9H0J9 701 aaKnown RBP11.05□□□□□ -0.64
VMP1-210ENST00000589823 GHITMQ9H3K2 345 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 PIPOXQ9P0Z9 390 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 ZNF221Q9UK13 617 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 OR2W1Q9Y3N9 320 aa11.05□□□□□ -0.64
VMP1-210ENST00000589823 SONP18583 2426 aaKnown RBP11.04□□□□□ -0.64
VMP1-210ENST00000589823 J3QRK9 145 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 RAB29O14966 203 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 CD74P04233 296 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 OR8U9P0C7N5 309 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms