RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	LPAR5	Q9H1C0	372 aa		13.06	□□□□□ -0.32
CIRBP-204	ENST00000585630	LIN7C	Q9NUP9	197 aa	Known RBP	13.06	□□□□□ -0.32
CIRBP-204	ENST00000585630	NDUFB11	Q9NX14	153 aa		13.06	□□□□□ -0.32
CIRBP-204	ENST00000585630	MOS	P00540	346 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	PF4V1	P10720	104 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	BLVRB	P30043	206 aa	Predicted RBP	13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	PPP1CC	P36873	323 aa	Known RBP	13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	LSAMP	Q13449	338 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	RAB11B	Q15907	218 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	LY6G6F	Q5SQ64	297 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	ZNF880	Q6PDB4	577 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	SLC35E3	Q7Z769	313 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630		Q8N9W7	124 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	OR52L2P	Q8NGH6	319 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	OR13F1	Q8NGS4	319 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	CHPT1	Q8WUD6	406 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	GALM	Q96C23	342 aa		13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	URM1	Q9BTM9	101 aa	Known RBP	13.05	□□□□□ -0.32
CIRBP-204	ENST00000585630	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	SERPINE3	A8MV23	424 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	ZNF736	B4DX44	427 aa	Predicted RBP	13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	YPEL1	O60688	119 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	RGS11	O94810	467 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	KHDC1L	Q5JSQ8	128 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	C5orf24	Q7Z6I8	188 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	FOXRED2	Q8IWF2	684 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	ODF3L1	Q8IXM7	274 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	FAM89B	Q8N5H3	189 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	OR8H1	Q8NGG4	311 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	NOL4L	Q96MY1	436 aa	Predicted RBP	13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	YPEL2	Q96QA6	119 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	ABCG5	Q9H222	651 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	PLEKHJ1	Q9NW61	149 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	ABRACL	Q9P1F3	81 aa		13.04	□□□□□ -0.32
CIRBP-204	ENST00000585630	TRBV6-6	A0A0A6YYG2	114 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	NCBP2L	A6PVI3	153 aa	Known RBP	13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	SOCS1	O15524	211 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	GPR12	P47775	334 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	CD200R1L	Q6Q8B3	271 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	GPR141	Q7Z602	305 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	ZNF329	Q86UD4	541 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	FAM71E2	Q8N5Q1	922 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	OR51D1	Q8NGF3	324 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	YIPF6	Q96EC8	236 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	RIMS4	Q9H426	269 aa	Predicted RBP	13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	PLSCR3	Q9NRY6	295 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	HSF4	Q9ULV5	492 aa		13.03	□□□□□ -0.32
CIRBP-204	ENST00000585630	TRDV1	A0A1B0GX56	115 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	SHISA3	A0PJX4	238 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	AP4M1	O00189	453 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	LDLRAD4	O15165	306 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	RANBP1	P43487	201 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	CLDN12	P56749	244 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	ZNF833P	Q6ZTB9	187 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	STPG2	Q8N412	459 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	OR2AK2	Q8NG84	335 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	IL1F10	Q8WWZ1	152 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	FAM3D	Q96BQ1	224 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	S1PR3	Q99500	378 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	MRPL20	Q9BYC9	149 aa	Known RBP	13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	IFI27L2	Q9H2X8	130 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	C12orf4	Q9NQ89	552 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	AK3	Q9UIJ7	227 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630		V9GY05	133 aa		13.02	□□□□□ -0.33
CIRBP-204	ENST00000585630	SAA2-SAA4	A0A096LPE2	208 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	TRAV1-2	A0A0B4J238	106 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	PF4	P02776	101 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	SAA2	P0DJI9	122 aa	Predicted RBP	13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	CD36	P16671	472 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	CD33	P20138	364 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	PSMD7	P51665	324 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	RPL23A	P62750	156 aa	Known RBP	13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	SLC35B1	P78383	322 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	HLA-DRB3	P79483	266 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	OXLD1	Q5BKU9	147 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	HES5	Q5TA89	166 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	C22orf42	Q6IC83	251 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	FAM71F2	Q6NXP2	309 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	COMMD1	Q8N668	190 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	SETD6	Q8TBK2	473 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	NABP2	Q9BQ15	211 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	STEAP1	Q9UHE8	339 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	LINC00527	Q9UJ94	153 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	MGAT4A	Q9UM21	535 aa		13.01	□□□□□ -0.33
CIRBP-204	ENST00000585630	TMEM272	A0A1B0GTI8	110 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	GAL	P22466	123 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	MYL9	P24844	172 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	VEGFC	P49767	419 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	OR10A3	P58181	314 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	REC114	Q7Z4M0	266 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	WFDC9	Q8NEX5	89 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	OR56B1	Q8NGI3	324 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	PHF21A	Q96BD5	680 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	RBMXL1	Q96E39	390 aa	Known RBP	13	□□□□□ -0.33
CIRBP-204	ENST00000585630	ARHGAP5-AS1	Q96IT6	56 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	PECR	Q9BY49	303 aa		13	□□□□□ -0.33
CIRBP-204	ENST00000585630	SMIM30	A4D0T7	59 aa		12.99	□□□□□ -0.33
CIRBP-204	ENST00000585630	LINC01548	A6NM66	108 aa		12.99	□□□□□ -0.33

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