RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 IGKV1D-12P01611 117 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 ISG15P05161 165 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 SRMP19623 302 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 IDNKQ5T6J7 187 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 ZNF429Q86V71 674 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 Q8N1Y9 231 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 OR1N2Q8NGR9 330 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 PCDHB16Q9NRJ7 776 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 DHDHQ9UQ10 334 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 IGKV1-9A0A0C4DH69 117 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 A0A1W2PPE3 182 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 A0A1W2PPK0 400 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 ZNF729A6NN14 1252 aaPredicted RBP14□□□□□ -0.17
TOP3A-220ENST00000585031 NCBP2LA6PVI3 153 aaKnown RBP14□□□□□ -0.17
TOP3A-220ENST00000585031 SOX2P48431 317 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 POU3F4P49335 361 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 SPIN3Q5JUX0 258 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 Q6P435 159 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 TGIF2LXQ8IUE1 241 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 LAX1Q8IWV1 398 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 Q8IYB0 196 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 PARP16Q8N5Y8 322 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 BORCS8Q96FH0 119 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 OR5B12Q96R08 314 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 ABRACLQ9P1F3 81 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 COMMD3Q9UBI1 195 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 CKLFQ9UBR5 152 aa14□□□□□ -0.17
TOP3A-220ENST00000585031 HECTD4Q9Y4D8 3996 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 KBTBD11-OT1A0A1B0GTJ5 212 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 IGHV4-30-4P0DP06 118 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 REG1BP48304 166 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 MADCAM1Q13477 382 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 ATXN7L3Q14CW9 347 aaPredicted RBP13.99□□□□□ -0.17
TOP3A-220ENST00000585031 SRSF7Q16629 238 aaKnown RBP eCLIP13.99□□□□□ -0.17
TOP3A-220ENST00000585031 KRBOX4Q5JUW0 171 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 OR8H3Q8N146 312 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 OR13A1Q8NGR1 328 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 TMEM106AQ96A25 262 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 DIRAS2Q96HU8 199 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 CCDC32Q9BV29 185 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 CHST5Q9GZS9 411 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 LIN7CQ9NUP9 197 aaKnown RBP13.99□□□□□ -0.17
TOP3A-220ENST00000585031 C19orf73Q9NVV2 129 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 GLS2Q9UI32 602 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 DAPK2Q9UIK4 370 aa13.99□□□□□ -0.17
TOP3A-220ENST00000585031 LOC107986453A0A1B0GWG9 222 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 SLC33A1O00400 549 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-220ENST00000585031 SH2D1BO14796 132 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 SAP30O75446 220 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 PTBP1P26599 531 aaKnown RBP eCLIP13.98□□□□□ -0.17
TOP3A-220ENST00000585031 GNG10P50151 68 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 RAB7AP51149 207 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 OR10A3P58181 314 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 SCN1BQ07699 218 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 ZNF616Q08AN1 781 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 LTC4SQ16873 150 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 LHFPL2Q6ZUX7 228 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 FAM71E2Q8N5Q1 922 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 ZNF491Q8N8L2 437 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 OR13C3Q8NGS6 347 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 DLX4Q92988 240 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-220ENST00000585031 ALX4Q9H161 411 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-220ENST00000585031 MIXL1Q9H2W2 232 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 ZCCHC4Q9H5U6 513 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 AMMECR1Q9Y4X0 333 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-220ENST00000585031 V9GY05 133 aa13.98□□□□□ -0.17
TOP3A-220ENST00000585031 IGHV1-3A0A0C4DH29 117 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 FABP12A6NFH5 140 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 FAM25AB3EWG3 89 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 FAM25CB3EWG5 89 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 FAM25GB3EWG6 89 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 ZNF736B4DX44 427 aaPredicted RBP13.97□□□□□ -0.17
TOP3A-220ENST00000585031 OVOL1O14753 267 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 UPK1BO75841 260 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 CSN2P05814 226 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 OR8U8P0C7N1 319 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 FSTP19883 344 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 TALDO1P37837 337 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 RUNX1Q01196 453 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 RGS21Q2M5E4 152 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 FAM131AQ6UXB0 335 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 MOB3BQ86TA1 216 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 RDH10Q8IZV5 341 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 OR10AC1Q8NH08 325 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 RFESDQ8TAC1 157 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 RFT1Q96AA3 541 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 GON7Q9BXV9 100 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 CALYQ9NYX4 217 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 IDI2-AS1Q9NZ38 188 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 AK6Q9Y3D8 172 aaKnown RBP13.97□□□□□ -0.17
TOP3A-220ENST00000585031 KIAA1109Q2LD37 5005 aa13.97□□□□□ -0.17
TOP3A-220ENST00000585031 FUOMA2VDF0 154 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 AIPO00170 330 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 SYT7O43581 403 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 HPGDSO60760 199 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 RANBP1P43487 201 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 RBP2P50120 134 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 SLURP1P55000 103 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 F2RL1P55085 397 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 PDZK1IP1Q13113 114 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms