RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 AICDAQ9GZX7 198 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CMC2Q9NRP2 79 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ASF1BQ9NVP2 202 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM38BQ9NVV0 291 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CCDC167Q9P0B6 97 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 AMMECR1Q9Y4X0 333 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 V9GYY9 64 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SETD2Q9BYW2 2564 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SCN2AQ99250 2005 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 FLNCQ14315 2725 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 FER1L5A0AVI2 2057 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 KBTBD11-OT1A0A1B0GTJ5 212 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A1B0GW15 77 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A1B0GW55 424 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 MSGN1A6NI15 193 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CYB5BO43169 146 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 NOS1APO75052 506 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 FADS2O95864 444 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV3-13P01766 116 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 HLA-HP01893 362 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 DUX4L2P0CJ85 424 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 DUX4L3P0CJ86 424 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 DUX4L4P0CJ87 422 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 DUX4L5P0CJ88 424 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 DUX4L6P0CJ89 424 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 DUX4L7P0CJ90 424 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF250P15622 560 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TALDO1P37837 337 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 RFC3P40938 356 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SUB1P53999 127 aaKnown RBP eCLIP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 PPP1CAP62136 330 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 MRPS25P82663 173 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF45Q02386 682 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SSBP1Q04837 148 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 MEF2CQ06413 473 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 PGGHGQ32M88 737 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 HIGD2BQ4VC39 106 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 COA6Q5JTJ3 125 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SPIN3Q5JUX0 258 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 HACD4Q5VWC8 232 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 DUX4L9Q6RFH8 374 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 PUSL1Q8N0Z8 303 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 OR52N1Q8NH53 320 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 OR51F2Q8NH61 342 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 OR56B4Q8NH76 319 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 NDNFQ8TB73 568 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF524Q96C55 264 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 P2RX4Q99571 388 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 EBPLQ9BY08 206 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2J1Q9GZK6 312 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF696Q9H7X3 374 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 MBD2Q9UBB5 411 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 KAAG1Q9UBP8 84 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 DUX4Q9UBX2 424 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CLN8Q9UBY8 286 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF107Q9UII5 783 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 RAB26Q9ULW5 256 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ING4Q9UNL4 249 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC7A11Q9UPY5 501 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC25A15Q9Y619 301 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CACNG2Q9Y698 323 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 EML6Q6ZMW3 1958 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SDK2Q58EX2 2172 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 HIVEP3Q5T1R4 2406 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ANK3Q12955 4377 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 PHF3Q92576 2039 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 IGLV3-9A0A075B6K5 115 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TRAV38-1A0A0B4J264 116 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF816-ZNF321PA0A0X1KG74 233 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM72A0PK05 275 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM212A6NML5 194 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SRRM4A7MD48 611 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CLDN25C9JDP6 229 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 LOC110117498-PIK3R3F6TDL0 507 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ATG12O94817 140 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SNAPINO95295 136 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TNFAIP8O95379 198 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ISG15P05161 165 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CT62P0C5K7 136 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TBPP20226 339 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 F2RP25116 425 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ERP29P30040 261 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CBX5P45973 191 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 KLF3P57682 345 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 MRPS10P82664 201 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 KRR1Q13601 381 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 DEFB113Q30KQ7 82 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM176BQ3YBM2 270 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF57Q68EA5 555 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 LEMD1Q68G75 181 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 FAHD1Q6P587 224 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF546Q86UE3 836 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF786Q8N393 782 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 UBAC2Q8NBM4 344 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 OR6N2Q8NGY6 317 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 MARCH1Q8TCQ1 289 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 NABP1Q96AH0 204 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 STARD4Q96DR4 205 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SMIM14Q96QK8 99 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2M2Q96R28 347 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms