RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 YPEL2Q96QA6 119 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 OR4F4Q96R69 305 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 HDHD3Q9BSH5 251 aaPredicted RBP16.21■□□□□ 0.19
SS18-224ENST00000584083 HSF4Q9ULV5 492 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 NOTCH1P46531 2555 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 TCRBV4S1A1TA0A5B7 111 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 ADARB2-AS1A8MUL3 147 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 ZNF736B4DX44 427 aaPredicted RBP16.2■□□□□ 0.18
SS18-224ENST00000584083 LANCL1O43813 399 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 MOSP00540 346 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 CD83Q01151 205 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 C22orf42Q6IC83 251 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 ZNF880Q6PDB4 577 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 C1QL4Q86Z23 238 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 OR56B1Q8NGI3 324 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 ARHGAP5-AS1Q96IT6 56 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 RAB22AQ9UL26 194 aa16.2■□□□□ 0.18
SS18-224ENST00000584083 TMEM272A0A1B0GTI8 110 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 SHISA3A0PJX4 238 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 SERPINE3A8MV23 424 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 RAB3BP20337 219 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 GALP22466 123 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 TMEM50BP56557 158 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 KHDC1LQ5JSQ8 128 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 LY6G6FQ5SQ64 297 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 C10orf99Q6UWK7 81 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 Q6ZPA2 131 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 SLC35E3Q7Z769 313 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 Q8N6K4 173 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 OR2AK2Q8NG84 335 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 PECRQ9BY49 303 aa16.19■□□□□ 0.18
SS18-224ENST00000584083 TRBV6-6A0A0A6YYG2 114 aa16.18■□□□□ 0.18
SS18-224ENST00000584083 PSMB11A5LHX3 300 aa16.18■□□□□ 0.18
SS18-224ENST00000584083 IFITM5A6NNB3 132 aa16.18■□□□□ 0.18
SS18-224ENST00000584083 FOXI3A8MTJ6 420 aaPredicted RBP16.18■□□□□ 0.18
SS18-224ENST00000584083 LDLRAD4O15165 306 aa16.18■□□□□ 0.18
SS18-224ENST00000584083 PLA2G7Q13093 441 aa16.18■□□□□ 0.18
SS18-224ENST00000584083 TCTEX1D4Q5JR98 221 aa16.18■□□□□ 0.18
SS18-224ENST00000584083 CMSS1Q9BQ75 279 aaKnown RBP16.18■□□□□ 0.18
SS18-224ENST00000584083 C12orf4Q9NQ89 552 aa16.18■□□□□ 0.18
SS18-224ENST00000584083 RRP15Q9Y3B9 282 aaKnown RBP16.18■□□□□ 0.18
SS18-224ENST00000584083 TSSC4Q9Y5U2 329 aaPredicted RBP16.18■□□□□ 0.18
SS18-224ENST00000584083 LSAMPQ13449 338 aa16.17■□□□□ 0.18
SS18-224ENST00000584083 ZNF773Q6PK81 442 aa16.17■□□□□ 0.18
SS18-224ENST00000584083 ZNF329Q86UD4 541 aa16.17■□□□□ 0.18
SS18-224ENST00000584083 FOXRED2Q8IWF2 684 aa16.17■□□□□ 0.18
SS18-224ENST00000584083 ODF3L1Q8IXM7 274 aa16.17■□□□□ 0.18
SS18-224ENST00000584083 Q8N9W7 124 aa16.17■□□□□ 0.18
SS18-224ENST00000584083 RBMXL1Q96E39 390 aaKnown RBP16.17■□□□□ 0.18
SS18-224ENST00000584083 NOL4LQ96MY1 436 aaPredicted RBP16.17■□□□□ 0.18
SS18-224ENST00000584083 RASL11BQ9BPW5 248 aa16.17■□□□□ 0.18
SS18-224ENST00000584083 LINC00527Q9UJ94 153 aa16.17■□□□□ 0.18
SS18-224ENST00000584083 MGAT4AQ9UM21 535 aa16.17■□□□□ 0.18
SS18-224ENST00000584083 SMIM30A4D0T7 59 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 HSPA12AO43301 675 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 IGHG2P01859 326 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 PF4V1P10720 104 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 OR3A3P47888 321 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 HLA-DRB3P79483 266 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 MRPS15P82914 257 aaKnown RBP16.16■□□□□ 0.18
SS18-224ENST00000584083 PLAC9Q5JTB6 97 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 OR8H1Q8NGG4 311 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 CHPT1Q8WUD6 406 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 RAB3CQ96E17 227 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 S1PR3Q99500 378 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 MRPL20Q9BYC9 149 aaKnown RBP16.16■□□□□ 0.18
SS18-224ENST00000584083 Q9N2K0 584 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 PLSCR3Q9NRY6 295 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 LIN7CQ9NUP9 197 aaKnown RBP16.16■□□□□ 0.18
SS18-224ENST00000584083 TXNL4BQ9NX01 149 aaKnown RBP16.16■□□□□ 0.18
SS18-224ENST00000584083 SLC23A1Q9UHI7 598 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 STUB1Q9UNE7 303 aa16.16■□□□□ 0.18
SS18-224ENST00000584083 SAA2-SAA4A0A096LPE2 208 aa16.15■□□□□ 0.18
SS18-224ENST00000584083 A0A0B4J203 849 aa16.15■□□□□ 0.18
SS18-224ENST00000584083 ST8SIA5O15466 376 aa16.15■□□□□ 0.18
SS18-224ENST00000584083 CD3GP09693 182 aa16.15■□□□□ 0.18
SS18-224ENST00000584083 SAA2P0DJI9 122 aaPredicted RBP16.15■□□□□ 0.18
SS18-224ENST00000584083 ZNF833PQ6ZTB9 187 aa16.15■□□□□ 0.18
SS18-224ENST00000584083 ABCG5Q9H222 651 aa16.15■□□□□ 0.18
SS18-224ENST00000584083 SSR3Q9UNL2 185 aa16.15■□□□□ 0.18
SS18-224ENST00000584083 LINC01548A6NM66 108 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 SCTP09683 121 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 RAB6AP20340 208 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 ZBTB25P24278 435 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 GADD45AP24522 165 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 FGF9P31371 208 aaPredicted RBP16.14■□□□□ 0.17
SS18-224ENST00000584083 CEACAM6P40199 344 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 GPR12P47775 334 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 F2RL1P55085 397 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 SLC35B1P78383 322 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 MOGAT2Q3SYC2 334 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 NABP2Q9BQ15 211 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 IFI27L2Q9H2X8 130 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 PIPOXQ9P0Z9 390 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 OR1A1Q9P1Q5 309 aa16.14■□□□□ 0.17
SS18-224ENST00000584083 A0A075B6Q4 140 aa16.13■□□□□ 0.17
SS18-224ENST00000584083 METTL21EPA6NDL7 271 aa16.13■□□□□ 0.17
SS18-224ENST00000584083 G3V4G9 280 aa16.13■□□□□ 0.17
SS18-224ENST00000584083 AP4M1O00189 453 aa16.13■□□□□ 0.17
SS18-224ENST00000584083 RAB29O14966 203 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms