RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 FABP4P15090 132 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 HBG1P69891 147 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 HBG2P69892 147 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 LRRC75BQ2VPJ9 315 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 LSM10Q969L4 123 aaKnown RBP11.6□□□□□ -0.55
RNF43-205ENST00000581868 RBKSQ9H477 322 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 SDF2L1Q9HCN8 221 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 PRSS50Q9UI38 385 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 MPC1Q9Y5U8 109 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 ESPL1Q14674 2120 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 PCSK5Q92824 1860 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 MAP1LC3B2A6NCE7 125 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 PGA5P0DJD9 388 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 CEACAM6P40199 344 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 LINC00696Q6ZRV3 163 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 TMEM105Q8N8V8 129 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 MBD3L1Q8WWY6 194 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 MAP1LC3BQ9GZQ8 125 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 B4GALT7Q9UBV7 327 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 TRIOBPQ9H2D6 2365 aa11.6□□□□□ -0.55
RNF43-205ENST00000581868 DIDO1Q9BTC0 2240 aaKnown RBP11.6□□□□□ -0.55
RNF43-205ENST00000581868 OR5B21A6NL26 309 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 ZNF729A6NN14 1252 aaPredicted RBP11.59□□□□□ -0.55
RNF43-205ENST00000581868 PNRC1Q12796 327 aaPredicted RBP11.59□□□□□ -0.55
RNF43-205ENST00000581868 LPAL2Q16609 132 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 ABHD17BQ5VST6 288 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 Q6P435 159 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 MCEMP1Q8IX19 187 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 OR51I2Q9H344 312 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 TREM2Q9NZC2 230 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 VAX2Q9UIW0 290 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 RNF150Q9ULK6 438 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 CHD3Q12873 2000 aaKnown RBP11.59□□□□□ -0.55
RNF43-205ENST00000581868 URB1O60287 2271 aaKnown RBP11.59□□□□□ -0.55
RNF43-205ENST00000581868 ZNF737O75373 536 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 CER1O95813 267 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 OR2H2O95918 312 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 PLGLB1Q02325 96 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 CLN3Q13286 438 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 ADIRFQ15847 76 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 TMEM41BQ5BJD5 291 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 OR13D1Q8NGV5 346 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 SNX22Q96L94 193 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 PSMG3Q9BT73 122 aaPredicted RBP11.59□□□□□ -0.55
RNF43-205ENST00000581868 TTTY12Q9BZ98 90 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 WDR61Q9GZS3 305 aaKnown RBP11.59□□□□□ -0.55
RNF43-205ENST00000581868 TMEM9BQ9NQ34 198 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 SLC39A9Q9NUM3 307 aa11.59□□□□□ -0.55
RNF43-205ENST00000581868 TNRC6AQ8NDV7 1962 aaKnown RBP11.59□□□□□ -0.55
RNF43-205ENST00000581868 B4E171 279 aa11.58□□□□□ -0.55
RNF43-205ENST00000581868 CLDN1O95832 211 aa11.58□□□□□ -0.55
RNF43-205ENST00000581868 MT-CO3P00414 261 aa11.58□□□□□ -0.55
RNF43-205ENST00000581868 TSPAN7P41732 249 aa11.58□□□□□ -0.55
RNF43-205ENST00000581868 KIAA2026Q5HYC2 2103 aa11.58□□□□□ -0.55
RNF43-205ENST00000581868 MRGPRGQ86SM5 289 aa11.58□□□□□ -0.55
RNF43-205ENST00000581868 NECAP1Q8NC96 275 aa11.58□□□□□ -0.55
RNF43-205ENST00000581868 LHX4Q969G2 390 aa11.58□□□□□ -0.55
RNF43-205ENST00000581868 PIGBOS1A0A0B4J2F0 54 aa11.58□□□□□ -0.56
RNF43-205ENST00000581868 OR5H1A6NKK0 313 aa11.58□□□□□ -0.56
RNF43-205ENST00000581868 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.58□□□□□ -0.56
RNF43-205ENST00000581868 NDUFS6O75380 124 aaKnown RBP11.58□□□□□ -0.56
RNF43-205ENST00000581868 CD55P08174 381 aa11.58□□□□□ -0.56
RNF43-205ENST00000581868 RPS16P62249 146 aaKnown RBP11.58□□□□□ -0.56
RNF43-205ENST00000581868 SERF2P84101 59 aa11.58□□□□□ -0.56
RNF43-205ENST00000581868 SLC38A11Q08AI6 406 aa11.58□□□□□ -0.56
RNF43-205ENST00000581868 OR1C1Q15619 314 aa11.58□□□□□ -0.56
RNF43-205ENST00000581868 FGFRL1Q8N441 504 aa11.58□□□□□ -0.56
RNF43-205ENST00000581868 DRAM1Q8N682 238 aa11.58□□□□□ -0.56
RNF43-205ENST00000581868 TAF15Q92804 592 aaKnown RBP eCLIP11.58□□□□□ -0.564e-7■■■■□ 23.8
RNF43-205ENST00000581868 S100PBPQ96BU1 408 aa11.58□□□□□ -0.56
RNF43-205ENST00000581868 LIN7CQ9NUP9 197 aaKnown RBP11.58□□□□□ -0.56
RNF43-205ENST00000581868 TNRC6BQ9UPQ9 1833 aaKnown RBP11.58□□□□□ -0.56
RNF43-205ENST00000581868 ELOA3CA0A087WX78 387 aaPredicted RBP11.57□□□□□ -0.56
RNF43-205ENST00000581868 LRP5LA4QPB2 252 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 J3QT63 122 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 PTBP3O95758 552 aaKnown RBP11.57□□□□□ -0.56
RNF43-205ENST00000581868 RND2P52198 227 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 DEFA6Q01524 100 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 TMEM251Q8N6I4 163 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 RPUSD4Q96CM3 377 aaKnown RBP11.57□□□□□ -0.56
RNF43-205ENST00000581868 RHOVQ96L33 236 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 SMIM7Q9BQ49 75 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 PKIBQ9C010 78 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 OPA3Q9H6K4 179 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 CDIPTO14735 213 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 KRASP01116 189 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 IFNA1P01562 189 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 IGKV1D-33P01593 117 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 IGKV1-33P01594 117 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 SELEP16581 610 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 TUBG1P23258 451 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 CLEC12BQ2HXU8 276 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 WDR25Q64LD2 544 aaPredicted RBP11.57□□□□□ -0.56
RNF43-205ENST00000581868 FAM53AQ6NSI3 398 aaPredicted RBP11.57□□□□□ -0.56
RNF43-205ENST00000581868 ZNF497Q6ZNH5 498 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 WDR86Q86TI4 376 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 MDP1Q86V88 176 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 RPP25LQ8N5L8 163 aaKnown RBP11.57□□□□□ -0.56
RNF43-205ENST00000581868 P2RX4Q99571 388 aa11.57□□□□□ -0.56
RNF43-205ENST00000581868 TMEM242Q9NWH2 141 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms