RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 WFDC10AQ9H1F0 79 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 IFT22Q9H7X7 185 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 SRD5A3Q9H8P0 318 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ETAA1Q9NY74 926 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 IL36GQ9NZH8 169 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ZNF581Q9P0T4 197 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 FOXA2Q9Y261 457 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ERGIC3Q9Y282 383 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 IGHV3-43A0A0B4J1X8 118 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 A0A0J9YWU9 116 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 H3BNX3 289 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 GEMIN2O14893 280 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 IGHV3-43DP0DP04 118 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 SERPINA2P20848 420 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ZNF93P35789 620 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 TPPP2P59282 170 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 MPV17LQ2QL34 196 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 NHLRC3Q5JS37 347 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 DDI2Q5TDH0 399 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 RPL22L1Q6P5R6 122 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 IL34Q6ZMJ4 242 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 STX19Q8N4C7 294 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 LINC00311Q8N616 119 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ABHD5Q8WTS1 349 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 RHOVQ96L33 236 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ANKRD60Q9BZ19 345 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 TMEM138Q9NPI0 162 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 MRPS18AQ9NVS2 196 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 PAK1IP1Q9NWT1 392 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 GFOD1Q9NXC2 390 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 FBXO7Q9Y3I1 522 aa9.99□□□□□ -0.81
CDK5RAP3-213ENST00000579605 LOC100130705A0A1B0GUX0 176 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ANKRD34BA5PLL1 514 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 C15orf65H3BRN8 121 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ARPC1BO15143 372 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ORC5O43913 435 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 CD7P09564 240 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 BDKRB2P30411 391 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 SYNJ2BPP57105 145 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 LRRC36Q1X8D7 754 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 CCDC58Q4VC31 144 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 LIN54Q6MZP7 749 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 TMPRSS11AQ6ZMR5 421 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 Q8N402 240 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 C8orf31Q8N9H6 132 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 OR9G4Q8NGQ1 327 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 TMEM106AQ96A25 262 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ZNF251Q9BRH9 671 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 OVOL2Q9BRP0 275 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 C9orf16Q9BUW7 83 aa9.98□□□□□ -0.81
CDK5RAP3-213ENST00000579605 AIPO00170 330 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 SLC31A2O15432 143 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ZNF780AO75290 641 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 HLA-DRB1P01911 266 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 MT-ND4P03905 459 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 TFAP2AP05549 437 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 LIMS3P0CW19 117 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 LIMS4P0CW20 117 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 GTF2F2P13984 249 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 VHLP40337 213 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ACTBP60709 375 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 PRR20EP86478 221 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 PRR20CP86479 221 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 PRR20DP86480 221 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 PRR20BP86481 221 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 PRR20AP86496 221 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 Q3ZCU0 254 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 SLC22A6Q4U2R8 563 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 C10orf67Q8IYJ2 551 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 KCTD12Q96CX2 325 aaKnown RBP9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 RANGRFQ9HD47 186 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 RAB9BQ9NP90 201 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 FGF20Q9NP95 211 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 TRAPPC2LQ9UL33 140 aa9.97□□□□□ -0.81
CDK5RAP3-213ENST00000579605 DYNC1H1Q14204 4646 aaKnown RBP9.96□□□□□ -0.81
CDK5RAP3-213ENST00000579605 OR11H12B2RN74 326 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 MCRIP1C9JLW8 97 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 TXNL1O43396 289 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CSN3P07498 182 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZP3P21754 424 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 NDPQ00604 133 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 RIPK1Q13546 671 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 KLF5Q13887 457 aaPredicted RBP9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 GPR176Q14439 515 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 XAF1Q6GPH4 301 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZNF497Q6ZNH5 498 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 APH1BQ8WW43 257 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZNF184Q99676 751 aaPredicted RBP9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 SLC29A1Q99808 456 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 SPACA1Q9HBV2 294 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 SLC2A8Q9NY64 477 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 GNG12Q9UBI6 72 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ADAM30Q9UKF2 790 aa9.96□□□□□ -0.82
CDK5RAP3-213ENST00000579605 A0A1W2PP11 408 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 IRGMA1A4Y4 181 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 SPINT2O43291 252 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 TRGV3P03979 118 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 DCKP27707 260 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ETV1P50549 477 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms