RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ZNF134P52741 427 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 TMEM50BP56557 158 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 KRTAP10-3P60369 221 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 ZNF816Q0VGE8 651 aaPredicted RBP5.24□□□□□ -1.57
TRAF4-213ENST00000578917 GNMTQ14749 295 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 ARL6IP1Q15041 203 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 TIMM50Q3ZCQ8 353 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 CDNFQ49AH0 187 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 KHDC1LQ5JSQ8 128 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 PRR31Q5SQ13 230 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 IDNKQ5T6J7 187 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 C5orf24Q7Z6I8 188 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 GAPTQ8N292 157 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 LINC00311Q8N616 119 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 OR10R2Q8NGX6 335 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 RTN4IP1Q8WWV3 396 aaPredicted RBP5.24□□□□□ -1.57
TRAF4-213ENST00000578917 YPEL2Q96QA6 119 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 RASL11BQ9BPW5 248 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 HDHD3Q9BSH5 251 aaPredicted RBP5.24□□□□□ -1.57
TRAF4-213ENST00000578917 ABHD14AQ9BUJ0 271 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 ZNF702PQ9H963 129 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 MBNL3Q9NUK0 354 aaKnown RBP5.24□□□□□ -1.57
TRAF4-213ENST00000578917 SLC23A1Q9UHI7 598 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 ZNF221Q9UK13 617 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 MOB4Q9Y3A3 225 aa5.24□□□□□ -1.57
TRAF4-213ENST00000578917 RBM7Q9Y580 266 aaKnown RBP5.24□□□□□ -1.57
TRAF4-213ENST00000578917 A0A1W2PPI3 338 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 A0A1W2PRX2 142 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 TCRBV4S1A1TA0A5B7 111 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 SHISA3A0PJX4 238 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 H7C2Y5 167 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 RAB29O14966 203 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 BET1O15155 118 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 ST8SIA5O15466 376 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 AIREO43918 545 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 SCGNO76038 276 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 SCTP09683 121 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 CD28P10747 220 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 SNRPBP14678 240 aaKnown RBP5.23□□□□□ -1.57
TRAF4-213ENST00000578917 CD1BP29016 333 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 OR3A3P47888 321 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 LSM3P62310 102 aaKnown RBP5.23□□□□□ -1.57
TRAF4-213ENST00000578917 PLA2G7Q13093 441 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 KIR2DS1Q14954 304 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 TMEM95Q3KNT9 176 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 PLAC9Q5JTB6 97 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 SFXN4Q6P4A7 337 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 Q6ZS46 218 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 FOXRED2Q8IWF2 684 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 Q8N2B8 174 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 OR4X2Q8NGF9 303 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 OR10J5Q8NHC4 309 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 EDARADDQ8WWZ3 215 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 ST6GALNAC6Q969X2 333 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 PTX4Q96A99 478 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 CYYR1Q96J86 154 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 EAF1Q96JC9 268 aaPredicted RBP5.23□□□□□ -1.57
TRAF4-213ENST00000578917 ZNF251Q9BRH9 671 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 GINS4Q9BRT9 223 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 CENPOQ9BU64 300 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 ST6GALNAC5Q9BVH7 336 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 MMP27Q9H306 513 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 GHITMQ9H3K2 345 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 Q9N2K0 584 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 SERTAD4Q9NUC0 356 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 PIPOXQ9P0Z9 390 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 RNF150Q9ULK6 438 aa5.23□□□□□ -1.57
TRAF4-213ENST00000578917 TRBV6-6A0A0A6YYG2 114 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 FAM90A9PA6NNJ1 464 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 ZNF736B4DX44 427 aaPredicted RBP5.22□□□□□ -1.57
TRAF4-213ENST00000578917 LDLRAD4O15165 306 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 FABP7O15540 132 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 FGF16O43320 207 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 LANCL1O43813 399 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 RRP9O43818 475 aaKnown RBP5.22□□□□□ -1.57
TRAF4-213ENST00000578917 OPN1MWP04001 364 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 GSTP1P09211 210 aaKnown RBP5.22□□□□□ -1.57
TRAF4-213ENST00000578917 CLEC2LP0C7M8 214 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 OPN1MW2P0DN77 364 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 OPN1MW3P0DN78 364 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 HIST1H1DP16402 221 aaKnown RBP5.22□□□□□ -1.57
TRAF4-213ENST00000578917 MC5RP33032 325 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 GPR12P47775 334 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 SERPINB10P48595 397 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 GNG2P59768 71 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 SLC35B1P78383 322 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 HLA-DRB3P79483 266 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 PITPNAQ00169 270 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 PLGLAQ15195 96 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 HMGN3Q15651 99 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 MOGAT2Q3SYC2 334 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 HIST2H2BDQ6DRA6 164 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 SLC35E3Q7Z769 313 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 NR2C2APQ86WQ0 139 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 CROCCP3Q8IVE0 287 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 ZNF439Q8NDP4 499 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 OR4F17Q8NGA8 305 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 OR8H1Q8NGG4 311 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 OR4A4PQ8NGN8 299 aa5.22□□□□□ -1.57
TRAF4-213ENST00000578917 CFHR4Q92496 578 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms