RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 SETD6Q8TBK2 473 aa11.55□□□□□ -0.56
MKS1-207ENST00000578789 CAPSLQ8WWF8 208 aa11.55□□□□□ -0.56
MKS1-207ENST00000578789 ABHD14AQ9BUJ0 271 aa11.55□□□□□ -0.56
MKS1-207ENST00000578789 SERTAD4Q9NUC0 356 aa11.55□□□□□ -0.56
MKS1-207ENST00000578789 SERPINE3A8MV23 424 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 M0QZK8 103 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 LANCL1O43813 399 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 TMEM127O75204 238 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 LPLP06858 475 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 SMIM18P0DKX4 95 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 REG1BP48304 166 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 BLCAPP62952 87 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 MXD1Q05195 221 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 LGALS14Q8TCE9 139 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.54□□□□□ -0.56
MKS1-207ENST00000578789 MOB4Q9Y3A3 225 aa11.54□□□□□ -0.56
MKS1-207ENST00000578789 ITGB1BP1O14713 200 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 AIREO43918 545 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 SCGNO76038 276 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 IGKV1D-33P01593 117 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 IGKV1-33P01594 117 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 AMY1AP04745 511 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 AMY2AP04746 511 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 FCGR3AP08637 254 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 CD3GP09693 182 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 SNRPBP14678 240 aaKnown RBP11.53□□□□□ -0.56
MKS1-207ENST00000578789 GNB3P16520 340 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 ARL6IP1Q15041 203 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 Q6ZS46 218 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 MOB3BQ86TA1 216 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 TGIF2LXQ8IUE1 241 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 ODF3L1Q8IXM7 274 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 LYG1Q8N1E2 194 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 KLHDC1Q8N7A1 406 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 OR2AK2Q8NG84 335 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 WIPF2Q8TF74 440 aaPredicted RBP11.53□□□□□ -0.56
MKS1-207ENST00000578789 IL1F10Q8WWZ1 152 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 ATG5Q9H1Y0 275 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 IFI27L2Q9H2X8 130 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 ETV7Q9Y603 341 aa11.53□□□□□ -0.56
MKS1-207ENST00000578789 FGF16O43320 207 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 SCTP09683 121 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 TMEM11P17152 192 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 CD1BP29016 333 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 TGFBR1P36897 503 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 MRPS15P82914 257 aaKnown RBP11.52□□□□□ -0.57
MKS1-207ENST00000578789 HERPUD1Q15011 391 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 FAM71F2Q6NXP2 309 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 Q8N6K4 173 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 OR13F1Q8NGS4 319 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 WNT10AQ9GZT5 417 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 RHBDL2Q9NX52 303 aa11.52□□□□□ -0.57
MKS1-207ENST00000578789 IGKV1-6A0A0C4DH72 117 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 TRDCB7Z8K6 153 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 DIRAS3O95661 229 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 ZBTB25P24278 435 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 VDAC2P45880 294 aaPredicted RBP11.51□□□□□ -0.57
MKS1-207ENST00000578789 HES1Q14469 280 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 KIR2DS1Q14954 304 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 SRSF7Q16629 238 aaKnown RBP eCLIP11.51□□□□□ -0.57
MKS1-207ENST00000578789 IDNKQ5T6J7 187 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 Q6ZS49 121 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 ZNF833PQ6ZTB9 187 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 CROCCP3Q8IVE0 287 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 C5orf56Q8N8D9 126 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 OR4A4PQ8NGN8 299 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 SLC25A38Q96DW6 304 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 CABLES2Q9BTV7 478 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 FUNDC2Q9BWH2 189 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 TOLLIPQ9H0E2 274 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 PARP12Q9H0J9 701 aaKnown RBP11.51□□□□□ -0.57
MKS1-207ENST00000578789 OR1A1Q9P1Q5 309 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 SLC23A1Q9UHI7 598 aa11.51□□□□□ -0.57
MKS1-207ENST00000578789 TET2Q6N021 2002 aaPredicted RBP11.5□□□□□ -0.57
MKS1-207ENST00000578789 A0A075B6Q4 140 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 SAA2-SAA4A0A096LPE2 208 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 IGHV3-72A0A0B4J1Y9 119 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 ST8SIA5O15466 376 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 FABP7O15540 132 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 SAA2P0DJI9 122 aaPredicted RBP11.5□□□□□ -0.57
MKS1-207ENST00000578789 VSIG10L2P0DP72 767 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 DTYMKP23919 212 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 LSAMPQ13449 338 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 ARFRP1Q13795 201 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 TMEM95Q3KNT9 176 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 ABCA11PQ4W5N1 156 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 OR5H6Q8NGV6 325 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 OR2T10Q8NGZ9 312 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 EDARADDQ8WWZ3 215 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 EAF1Q96JC9 268 aaPredicted RBP11.5□□□□□ -0.57
MKS1-207ENST00000578789 NABP2Q9BQ15 211 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 GHITMQ9H3K2 345 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 PIPOXQ9P0Z9 390 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 SPATA2Q9UM82 520 aa11.5□□□□□ -0.57
MKS1-207ENST00000578789 ZNF736B4DX44 427 aaPredicted RBP11.49□□□□□ -0.57
MKS1-207ENST00000578789 MOSP00540 346 aa11.49□□□□□ -0.57
MKS1-207ENST00000578789 GSTP1P09211 210 aaKnown RBP11.49□□□□□ -0.57
MKS1-207ENST00000578789 RPS19P39019 145 aaKnown RBP11.49□□□□□ -0.57
MKS1-207ENST00000578789 SERPINB10P48595 397 aa11.49□□□□□ -0.57
MKS1-207ENST00000578789 LSM3P62310 102 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms