RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 BAMBIQ13145 260 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 KCNJ8Q15842 424 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 IGSF11Q5DX21 431 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 KRBOX4Q5JUW0 171 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 ZNF880Q6PDB4 577 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 KCTD9Q7L273 389 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 CMTM1Q8IZ96 169 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 ZNF561Q8N587 486 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 GCSAMQ8N6F7 178 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 ADAD2Q8NCV1 583 aaKnown RBP8.43□□□□□ -1.06
SS18-210ENST00000578700 PLPPR1Q8TBJ4 325 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 MITD1Q8WV92 249 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 IL1F10Q8WWZ1 152 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 MRGPRFQ96AM1 343 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 MOB3AQ96BX8 217 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 GALMQ96C23 342 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 SNX22Q96L94 193 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 JMJD8Q96S16 334 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 C5orf66Q9H5L9 145 aa8.43□□□□□ -1.06
SS18-210ENST00000578700 A0A0B4J2A0 478 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 MGST3O14880 152 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 TMPRSS2O15393 492 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 SPINT2O43291 252 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 RGS11O94810 467 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 SFT2D2O95562 160 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 AVPP01185 164 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 LHBP01229 141 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 SCTP09683 121 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 PSG2P11465 335 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 RCC1P18754 421 aaPredicted RBP8.42□□□□□ -1.06
SS18-210ENST00000578700 C4BPBP20851 252 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 AADACP22760 399 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 NFYAP23511 347 aaPredicted RBP8.42□□□□□ -1.06
SS18-210ENST00000578700 CD80P33681 288 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 SRPXP78539 464 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 CYCSP99999 105 aaKnown RBP8.42□□□□□ -1.06
SS18-210ENST00000578700 DHODHQ02127 395 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 FGL1Q08830 312 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 ZNF660Q6AZW8 331 aaPredicted RBP8.42□□□□□ -1.06
SS18-210ENST00000578700 NLRC3Q7RTR2 1065 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 GAPTQ8N292 157 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 OR2T35Q8NGX2 323 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 C22orf15Q8WYQ4 148 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 CYYR1Q96J86 154 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 RTBDNQ9BSG5 229 aaPredicted RBP8.42□□□□□ -1.06
SS18-210ENST00000578700 CABLES2Q9BTV7 478 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 TMPRSS13Q9BYE2 586 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 METTL8Q9H825 291 aaKnown RBP8.42□□□□□ -1.06
SS18-210ENST00000578700 TAF9BQ9HBM6 251 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 COMMD9Q9P000 198 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 SHPKQ9UHJ6 478 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 KIF25Q9UIL4 384 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 PPIAL4AQ9Y536 164 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 RBM7Q9Y580 266 aaKnown RBP8.42□□□□□ -1.06
SS18-210ENST00000578700 NOTCH1P46531 2555 aa8.42□□□□□ -1.06
SS18-210ENST00000578700 TRBV6-7A0A0A0MS04 114 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 TRAV38-1A0A0B4J264 116 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 FAM25EA8MYX2 175 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 NPIPB11E5RHQ5 1161 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 C3orf80F5H4A9 247 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 PSPNO60542 156 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 CYB5R3P00387 301 aaPredicted RBP8.41□□□□□ -1.06
SS18-210ENST00000578700 IFNA21P01568 189 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 PI3P19957 117 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 GZMHP20718 246 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 OR3A1P47881 315 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 LUMP51884 338 aaPredicted RBP8.41□□□□□ -1.06
SS18-210ENST00000578700 PIGPP57054 158 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 PAX5Q02548 391 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 AESQ08117 197 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 EDDM3AQ14507 147 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 SLC9A3R2Q15599 337 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 HFEQ30201 348 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 AVPI1Q5T686 147 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 GSG1LQ6UXU4 331 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 C1orf229Q6ZS94 237 aaPredicted RBP8.41□□□□□ -1.06
SS18-210ENST00000578700 PRR18Q8N4B5 295 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 CD177Q8N6Q3 437 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 SECTM1Q8WVN6 248 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 RTN4IP1Q8WWV3 396 aaPredicted RBP8.41□□□□□ -1.06
SS18-210ENST00000578700 RSRP1Q9BUV0 290 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 SUCNR1Q9BXA5 334 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 SLC5A7Q9GZV3 580 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 FXYD6Q9H0Q3 95 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 FAM234AQ9H0X4 552 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 ZNF665Q9H7R5 613 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 MBNL3Q9NUK0 354 aaKnown RBP8.41□□□□□ -1.06
SS18-210ENST00000578700 OR6C3Q9NZP0 311 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 OPN4Q9UHM6 478 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 OR2W1Q9Y3N9 320 aa8.41□□□□□ -1.06
SS18-210ENST00000578700 IGKV1D-17A0A075B6S4 117 aa8.4□□□□□ -1.06
SS18-210ENST00000578700 PPIAL4EA0A075B759 164 aa8.4□□□□□ -1.06
SS18-210ENST00000578700 IGHV3OR15-7A0A075B7D8 119 aa8.4□□□□□ -1.06
SS18-210ENST00000578700 TRAV20A0A0B4J274 112 aa8.4□□□□□ -1.06
SS18-210ENST00000578700 C13orf42A0A1B0GVH6 325 aa8.4□□□□□ -1.06
SS18-210ENST00000578700 C5orf51A6NDU8 294 aa8.4□□□□□ -1.06
SS18-210ENST00000578700 CRYM-AS1A6NIL9 109 aa8.4□□□□□ -1.06
SS18-210ENST00000578700 PPIAL4DF5H284 164 aa8.4□□□□□ -1.06
SS18-210ENST00000578700 K7N7A8 449 aa8.4□□□□□ -1.06
SS18-210ENST00000578700 LGALS8O00214 317 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms