RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 OR10A7Q8NGE5 316 aa9.3□□□□□ -0.92
SKA2-204ENST00000578519 OR51H1Q8NH63 302 aa9.3□□□□□ -0.92
SKA2-204ENST00000578519 RAB40CQ96S21 281 aa9.3□□□□□ -0.92
SKA2-204ENST00000578519 GAB2Q9UQC2 676 aa9.3□□□□□ -0.92
SKA2-204ENST00000578519 RCL1Q9Y2P8 373 aaKnown RBP9.3□□□□□ -0.92
SKA2-204ENST00000578519 PRELID3BQ9Y3B1 194 aa9.3□□□□□ -0.92
SKA2-204ENST00000578519 RNF115Q9Y4L5 304 aa9.3□□□□□ -0.92
SKA2-204ENST00000578519 PPIAL4AQ9Y536 164 aa9.3□□□□□ -0.92
SKA2-204ENST00000578519 URB1O60287 2271 aaKnown RBP9.3□□□□□ -0.92
SKA2-204ENST00000578519 INTS1Q8N201 2190 aaKnown RBP9.3□□□□□ -0.92
SKA2-204ENST00000578519 GVINP1Q7Z2Y8 2422 aa9.3□□□□□ -0.92
SKA2-204ENST00000578519 RPS10-NUDT3A0A1W2PQS6 291 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 ZNF729A6NN14 1252 aaPredicted RBP9.29□□□□□ -0.92
SKA2-204ENST00000578519 FAM90A27PA6NNH2 459 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 LEUTXA8MZ59 168 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 FAM90A26D6RGX4 464 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 F2RL2O00254 374 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 SIGLEC5O15389 551 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 TNFSF12O43508 249 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 CLDN1O95832 211 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 C1QTNF9P0C862 333 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 GPR12P47775 334 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 BLOC1S1P78537 153 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 ID3Q02535 119 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 BAXQ07812 192 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 ZNF266Q14584 549 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 ADAM5Q6NVV9 412 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 ZNF788Q6ZQV5 615 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.29□□□□□ -0.92
SKA2-204ENST00000578519 OR52L2PQ8NGH6 319 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 OR52M1Q8NGK5 317 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 OR13A1Q8NGR1 328 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 LHFPL5Q8TAF8 219 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 CORO2AQ92828 525 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 ADTRPQ96IZ2 230 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 OR2D2Q9H210 308 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 TAS2R3Q9NYW6 316 aa9.29□□□□□ -0.92
SKA2-204ENST00000578519 IGHV3OR15-7A0A075B7D8 119 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 SHISA9B4DS77 424 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 C3orf80F5H4A9 247 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 C15orf65H3BRN8 121 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 CYB5R3P00387 301 aaPredicted RBP9.28□□□□□ -0.92
SKA2-204ENST00000578519 NMBP08949 121 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 LPAR6P43657 344 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 MORN2Q502X0 79 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 LRRC10Q5BKY1 277 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 NMSQ5H8A3 153 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 C22orf34Q6ZV56 151 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 ZNF808Q8N4W9 903 aaPredicted RBP9.28□□□□□ -0.92
SKA2-204ENST00000578519 OR2C3Q8N628 320 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 TCTEX1D2Q8WW35 142 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 SAT2Q96F10 170 aaPredicted RBP9.28□□□□□ -0.92
SKA2-204ENST00000578519 GAL3ST2Q9H3Q3 398 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 COA4Q9NYJ1 87 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 CALYQ9NYX4 217 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 CISD1Q9NZ45 108 aaKnown RBP9.28□□□□□ -0.92
SKA2-204ENST00000578519 MMP24Q9Y5R2 645 aa9.28□□□□□ -0.92
SKA2-204ENST00000578519 KBTBD11-OT1A0A1B0GTJ5 212 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.27□□□□□ -0.93
SKA2-204ENST00000578519 KRBOX1C9JBD0 128 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 E7EQL1 145 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 TMEM178BH3BS89 294 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 TEX46H3BTG2 121 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 TOR1AO14656 332 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 NDUFB3O43676 98 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 DFFBO76075 338 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 PPP1CCP36873 323 aaKnown RBP9.27□□□□□ -0.93
SKA2-204ENST00000578519 RAB5CP51148 216 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 TMEM33P57088 247 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 TAS2R30P59541 319 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 CCL8P80075 99 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 SWI5Q1ZZU3 235 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 Q3ZCU0 254 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 HSD17B13Q7Z5P4 300 aaPredicted RBP9.27□□□□□ -0.93
SKA2-204ENST00000578519 C5orf24Q7Z6I8 188 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 STX12Q86Y82 276 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 UBAC2Q8NBM4 344 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 ZNRF1Q8ND25 227 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 DEFB108BQ8NET1 73 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 RFESDQ8TAC1 157 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 GPR146Q96CH1 333 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 GAFA1Q96PS6 74 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 AIFM2Q9BRQ8 373 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 CYTL1Q9NRR1 136 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 TMEM106BQ9NUM4 274 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 IDI2-AS1Q9NZ38 188 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 CLN8Q9UBY8 286 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 RNF150Q9ULK6 438 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 PSG11Q9UQ72 335 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 LINC00312Q9Y6C7 94 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 VPS13AQ96RL7 3174 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 MUC3AQ02505 3323 aa9.27□□□□□ -0.93
SKA2-204ENST00000578519 A0A1W2PPH5 198 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 FAM90A9PA6NNJ1 464 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 RAB29O14966 203 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 FSTL3O95633 263 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 GYPAP02724 150 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 SEC11BP0C7V7 166 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 NDUFB7P17568 137 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 AGAP20933 346 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms