RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 GFOD1Q9NXC2 390 aa15.32■□□□□ 0.04
PRKCA-203ENST00000578063 KCNS2Q9ULS6 477 aa15.32■□□□□ 0.04
PRKCA-203ENST00000578063 WNT2P09544 360 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 MORN2Q502X0 79 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 TMEM200BQ69YZ2 307 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 LIN54Q6MZP7 749 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 KCTD9Q7L273 389 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 ZNF645Q8N7E2 425 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 ZBTB34Q8NCN2 500 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 ASB13Q8WXK3 278 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 DBX1A6NMT0 343 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 ITGB1BP1O14713 200 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 IGHV4-39P01824 125 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 GIPP09681 153 aaPredicted RBP15.31■□□□□ 0.04
PRKCA-203ENST00000578063 HLA-GP17693 338 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 OMGP23515 440 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 LY6G6FQ5SQ64 297 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 TBC1D26Q86UD7 250 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 ZNF295-AS1Q8N0V1 137 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 OR5M8Q8NGP6 311 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 OR2D2Q9H210 308 aa15.31■□□□□ 0.04
PRKCA-203ENST00000578063 PATZ1Q9HBE1 687 aaKnown RBP15.31■□□□□ 0.04
PRKCA-203ENST00000578063 KIAA2026Q5HYC2 2103 aa15.3■□□□□ 0.04
PRKCA-203ENST00000578063 TENM4Q6N022 2769 aa15.3■□□□□ 0.04
PRKCA-203ENST00000578063 OR5AC1P0C628 307 aa15.3■□□□□ 0.04
PRKCA-203ENST00000578063 ANKRD55Q3KP44 614 aa15.3■□□□□ 0.04
PRKCA-203ENST00000578063 FAM53AQ6NSI3 398 aaPredicted RBP15.3■□□□□ 0.04
PRKCA-203ENST00000578063 DMRTB1Q96MA1 342 aa15.3■□□□□ 0.04
PRKCA-203ENST00000578063 BARX1Q9HBU1 254 aaPredicted RBP15.3■□□□□ 0.04
PRKCA-203ENST00000578063 DCHS2Q6V1P9 2916 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 C3orf85A0A1B0GTC6 90 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 F5H0A9 414 aaPredicted RBP15.29■□□□□ 0.04
PRKCA-203ENST00000578063 PGLYRP1O75594 196 aaPredicted RBP15.29■□□□□ 0.04
PRKCA-203ENST00000578063 B3GALNT1O75752 331 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 OR2A4O95047 310 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 IGLV2-14P01704 120 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 PDLIM4P50479 330 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 SRPXP78539 464 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 TMEM187Q14656 261 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 C2orf68Q2NKX9 166 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 ZFP69Q49AA0 526 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 WDR25Q64LD2 544 aaPredicted RBP15.29■□□□□ 0.04
PRKCA-203ENST00000578063 HEPN1Q6WQI6 88 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 ZNF525Q8N782 197 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 RAB39BQ96DA2 213 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 OR2A7Q96R45 310 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 RAB18Q9NP72 206 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 RPUSD1Q9UJJ7 312 aaKnown RBP15.29■□□□□ 0.04
PRKCA-203ENST00000578063 DSCAML1Q8TD84 2053 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 A0A1W2PPH5 198 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 PHF1O43189 567 aaPredicted RBP15.29■□□□□ 0.04
PRKCA-203ENST00000578063 CCL3L1P16619 93 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 COL8A1P27658 744 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 RAB7AP51149 207 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 RAP2BP61225 183 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 C11orf91Q3C1V1 193 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 PRAMEF5Q5TYX0 476 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 DRAM1Q8N682 238 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 C8orf46Q8TAG6 207 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 PSG11Q9UQ72 335 aa15.29■□□□□ 0.04
PRKCA-203ENST00000578063 USF3Q68DE3 2245 aa15.28■□□□□ 0.04
PRKCA-203ENST00000578063 RNF212BA8MTL3 300 aa15.28■□□□□ 0.04
PRKCA-203ENST00000578063 H0Y980 276 aa15.28■□□□□ 0.04
PRKCA-203ENST00000578063 EIF2B2P49770 351 aaKnown RBP15.28■□□□□ 0.04
PRKCA-203ENST00000578063 H2BFSP57053 126 aa15.28■□□□□ 0.04
PRKCA-203ENST00000578063 LIAT1Q6ZQX7 453 aa15.28■□□□□ 0.04
PRKCA-203ENST00000578063 LRTM2Q8N967 370 aa15.28■□□□□ 0.04
PRKCA-203ENST00000578063 AGMATQ9BSE5 352 aa15.28■□□□□ 0.04
PRKCA-203ENST00000578063 ABHD14AQ9BUJ0 271 aa15.28■□□□□ 0.04
PRKCA-203ENST00000578063 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
PRKCA-203ENST00000578063 PRR13Q9NZ81 148 aa15.28■□□□□ 0.04
PRKCA-203ENST00000578063 ST8SIA5O15466 376 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 TNFSF12O43508 249 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 F2RP25116 425 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 NFYBP25208 207 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 DLX6P56179 175 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 GNB2P62879 340 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 SP6Q3SY56 376 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 Q3ZCU0 254 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 LGI3Q8N145 548 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 GLYATL2Q8WU03 294 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 TP53RKQ96S44 253 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 TMEM222Q9H0R3 208 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 LIN7CQ9NUP9 197 aaKnown RBP15.27■□□□□ 0.04
PRKCA-203ENST00000578063 PIPOXQ9P0Z9 390 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 RNF150Q9ULK6 438 aa15.27■□□□□ 0.04
PRKCA-203ENST00000578063 PIGBOS1A0A0B4J2F0 54 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 SIX6O95475 246 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 C1QBP02746 253 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 SSTR2P30874 369 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 ESCO2Q56NI9 601 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 DCAF12L2Q5VW00 463 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 MSI2Q96DH6 328 aaKnown RBP15.26■□□□□ 0.03
PRKCA-203ENST00000578063 SSBP3Q9BWW4 388 aaPredicted RBP15.26■□□□□ 0.03
PRKCA-203ENST00000578063 NARFLQ9H6Q4 476 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 CCSO14618 274 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 MMP23AO75900 390 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 PAX1P15863 534 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 UCP1P25874 307 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 GPR12P47775 334 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms