RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 CITED1Q99966 193 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 FUNDC2Q9BWH2 189 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 SIGLEC9Q9Y336 463 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 SNRNP70P08621 437 aaKnown RBP15.44■□□□□ 0.06
SS18-208ENST00000577751 SCTP09683 121 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 CD3GP09693 182 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 RPS19P39019 145 aaKnown RBP15.44■□□□□ 0.06
SS18-208ENST00000577751 REG1BP48304 166 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 EBI3Q14213 229 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 ARL6IP1Q15041 203 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 ODF3L1Q8IXM7 274 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 AKR1E2Q96JD6 320 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 SLC25A33Q9BSK2 321 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 ABHD14AQ9BUJ0 271 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 PRSS22Q9GZN4 317 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 ETV7Q9Y603 341 aa15.44■□□□□ 0.06
SS18-208ENST00000577751 FCGR3AP08637 254 aa15.43■□□□□ 0.06
SS18-208ENST00000577751 LSM3P62310 102 aaKnown RBP15.43■□□□□ 0.06
SS18-208ENST00000577751 IDNKQ5T6J7 187 aa15.43■□□□□ 0.06
SS18-208ENST00000577751 Q6ZS46 218 aa15.43■□□□□ 0.06
SS18-208ENST00000577751 CROCCP3Q8IVE0 287 aa15.43■□□□□ 0.06
SS18-208ENST00000577751 LYG1Q8N1E2 194 aa15.43■□□□□ 0.06
SS18-208ENST00000577751 OR5H6Q8NGV6 325 aa15.43■□□□□ 0.06
SS18-208ENST00000577751 SERTAD4Q9NUC0 356 aa15.43■□□□□ 0.06
SS18-208ENST00000577751 A0A075B6Q4 140 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 TRDCB7Z8K6 153 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 ITGB1BP1O14713 200 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 TXNL1O43396 289 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 LANCL1O43813 399 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 SCGNO76038 276 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 AMY1AP04745 511 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 AMY2AP04746 511 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 MRPS15P82914 257 aaKnown RBP15.42■□□□□ 0.06
SS18-208ENST00000577751 MOB3BQ86TA1 216 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 IZUMO1Q8IYV9 350 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 SGMS2Q8NHU3 365 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 SLC25A38Q96DW6 304 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 RHBDL2Q9NX52 303 aa15.42■□□□□ 0.06
SS18-208ENST00000577751 ELF5Q9UKW6 265 aaPredicted RBP15.42■□□□□ 0.06
SS18-208ENST00000577751 IGKV1-6A0A0C4DH72 117 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 IGKV1D-33P01593 117 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 IGKV1-33P01594 117 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 LPLP06858 475 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 ZBTB25P24278 435 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 CD1BP29016 333 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 SRSF7Q16629 238 aaKnown RBP eCLIP15.41■□□□□ 0.06
SS18-208ENST00000577751 CDNFQ49AH0 187 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 Q6ZS49 121 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 TGIF2LXQ8IUE1 241 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 OR2AK2Q8NG84 335 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 OR4A4PQ8NGN8 299 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 MRPS26Q9BYN8 205 aaKnown RBP15.41■□□□□ 0.06
SS18-208ENST00000577751 IFI27L2Q9H2X8 130 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 OR1A1Q9P1Q5 309 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 SLC23A1Q9UHI7 598 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 SPATA2Q9UM82 520 aa15.41■□□□□ 0.06
SS18-208ENST00000577751 GSTP1P09211 210 aaKnown RBP15.4■□□□□ 0.06
SS18-208ENST00000577751 CEACAM6P40199 344 aa15.4■□□□□ 0.06
SS18-208ENST00000577751 ARFRP1Q13795 201 aa15.4■□□□□ 0.06
SS18-208ENST00000577751 HERPUD1Q15011 391 aa15.4■□□□□ 0.06
SS18-208ENST00000577751 ZNF260Q3ZCT1 412 aa15.4■□□□□ 0.06
SS18-208ENST00000577751 HACD4Q5VWC8 232 aa15.4■□□□□ 0.06
SS18-208ENST00000577751 ZNF833PQ6ZTB9 187 aa15.4■□□□□ 0.06
SS18-208ENST00000577751 Q8N6K4 173 aa15.4■□□□□ 0.06
SS18-208ENST00000577751 AGMATQ9BSE5 352 aa15.4■□□□□ 0.06
SS18-208ENST00000577751 TOLLIPQ9H0E2 274 aa15.4■□□□□ 0.06
SS18-208ENST00000577751 PARP12Q9H0J9 701 aaKnown RBP15.4■□□□□ 0.06
SS18-208ENST00000577751 IGHV3-72A0A0B4J1Y9 119 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 ZNF736B4DX44 427 aaPredicted RBP15.39■□□□□ 0.05
SS18-208ENST00000577751 M0QZK8 103 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 FABP7O15540 132 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 DIRAS3O95661 229 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 TFAP2AP05549 437 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 TMEM11P17152 192 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 ALDH3B2P48448 385 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 NCS1P62166 190 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 HES1Q14469 280 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 KIR2DS1Q14954 304 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 ANKRD13BQ86YJ7 626 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 EAF1Q96JC9 268 aaPredicted RBP15.39■□□□□ 0.05
SS18-208ENST00000577751 ZNF251Q9BRH9 671 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 CABLES2Q9BTV7 478 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 WNT10AQ9GZT5 417 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 GHITMQ9H3K2 345 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 PIPOXQ9P0Z9 390 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 ZNF230Q9UIE0 474 aaPredicted RBP15.39■□□□□ 0.05
SS18-208ENST00000577751 MOB4Q9Y3A3 225 aa15.39■□□□□ 0.05
SS18-208ENST00000577751 SAA2-SAA4A0A096LPE2 208 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 A0A0A6YYH2 397 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 A6NJ64 397 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 ST8SIA5O15466 376 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 HSPA12AO43301 675 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 FGF16O43320 207 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 GSTT2P0CG29 244 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 GSTT2BP0CG30 244 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 SAA2P0DJI9 122 aaPredicted RBP15.38■□□□□ 0.05
SS18-208ENST00000577751 DTYMKP23919 212 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 SERPINB10P48595 397 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 VBP1P61758 197 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 PITPNAQ00169 270 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms