RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 FAM172BPA6NC97 362 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 HSPA12AO43301 675 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 NDUFA2O43678 99 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 MMP23AO75900 390 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 DHFRP00374 187 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 PPYP01298 95 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 IGHV3-7P01780 117 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 ZNF728P0DKX0 622 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 CCL3L1P16619 93 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 FPR2P25090 351 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 ERP29P30040 261 aaKnown RBP8.28□□□□□ -1.08
CRLF3-202ENST00000577725 PPP1CCP36873 323 aaKnown RBP8.28□□□□□ -1.08
CRLF3-202ENST00000577725 PDLIM4P50479 330 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 ERVFRD-1P60508 538 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 RPL31P62899 125 aaKnown RBP8.28□□□□□ -1.08
CRLF3-202ENST00000577725 PAX5Q02548 391 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 CBX3Q13185 183 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 DHRS11Q6UWP2 260 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 ZNF841Q6ZN19 808 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.28□□□□□ -1.08
CRLF3-202ENST00000577725 ZDHHC22Q8N966 263 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 OR8B3Q8NGG8 313 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 OR10J5Q8NHC4 309 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 SECTM1Q8WVN6 248 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 OR8B2Q96RD0 313 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 SLC25A21Q9BQT8 299 aaPredicted RBP8.28□□□□□ -1.08
CRLF3-202ENST00000577725 RDH8Q9NYR8 311 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 ZNF221Q9UK13 617 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 PCDHB10Q9UN67 800 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 GPR132Q9UNW8 380 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 TRGV10A0A0A0MS01 117 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 HSD17B6O14756 317 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 SPINT2O43291 252 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 TCF21O43680 179 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 TUSC2O75896 110 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 DIRAS3O95661 229 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 WNT2P09544 360 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 CTXN2P0C2S0 81 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 CGB3P0DN86 165 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 CGB7P0DN87 165 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 AKR1C4P17516 323 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 CEACAM6P40199 344 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 COMPP49747 757 aaPredicted RBP8.27□□□□□ -1.09
CRLF3-202ENST00000577725 TMEM33P57088 247 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 UBE2MP61081 183 aaKnown RBP8.27□□□□□ -1.09
CRLF3-202ENST00000577725 TMEM155Q4W5P6 130 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 PHLDA2Q53GA4 152 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 TMEM200BQ69YZ2 307 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 TRAT1Q6PIZ9 186 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 SPICQ8N5J4 248 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 LEAP2Q969E1 77 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 TMEM230Q96A57 120 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 MOB3AQ96BX8 217 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 GALMQ96C23 342 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 NEIL1Q96FI4 390 aaPredicted RBP8.27□□□□□ -1.09
CRLF3-202ENST00000577725 GPHA2Q96T91 129 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 RTBDNQ9BSG5 229 aaPredicted RBP8.27□□□□□ -1.09
CRLF3-202ENST00000577725 KRTAP17-1Q9BYP8 105 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 BPESC1Q9GZL8 116 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 SLC5A7Q9GZV3 580 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 OR51J1Q9H342 316 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 C5orf66Q9H5L9 145 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 PATZ1Q9HBE1 687 aaKnown RBP8.27□□□□□ -1.09
CRLF3-202ENST00000577725 PRR13Q9NZ81 148 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 OR6C3Q9NZP0 311 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 MIOXQ9UGB7 285 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 RNF150Q9ULK6 438 aa8.27□□□□□ -1.09
CRLF3-202ENST00000577725 KBTBD11-OT1A0A1B0GTJ5 212 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 A0A1W2PPE3 182 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 hADV38S2A0JD32 116 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 C22orf46C9J442 243 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 F5H0A9 414 aaPredicted RBP8.26□□□□□ -1.09
CRLF3-202ENST00000577725 IL5P05113 134 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 NFYBP25208 207 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 DLX1P56177 255 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 PRB3Q04118 309 aaPredicted RBP8.26□□□□□ -1.09
CRLF3-202ENST00000577725 CD300CQ08708 224 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 PPP1R1AQ13522 171 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 SLC9A3R2Q15599 337 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 C4orf46Q504U0 113 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 WDR25Q64LD2 544 aaPredicted RBP8.26□□□□□ -1.09
CRLF3-202ENST00000577725 GLDNQ6ZMI3 551 aaPredicted RBP8.26□□□□□ -1.09
CRLF3-202ENST00000577725 SLC25A42Q86VD7 318 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 CLDND2Q8NHS1 167 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 CASTOR1Q8WTX7 329 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 GHITMQ9H3K2 345 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 NCOR1P1Q9H4R4 102 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 OR2S2Q9NQN1 319 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 CCL28Q9NRJ3 127 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 IDI2-AS1Q9NZ38 188 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 CLN8Q9UBY8 286 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 KCNS2Q9ULS6 477 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 C14orf166Q9Y224 244 aaKnown RBP8.26□□□□□ -1.09
CRLF3-202ENST00000577725 LINC00312Q9Y6C7 94 aa8.26□□□□□ -1.09
CRLF3-202ENST00000577725 IGHV4-30-2A0A087WSY4 118 aa8.25□□□□□ -1.09
CRLF3-202ENST00000577725 C7orf66A4D0T2 115 aa8.25□□□□□ -1.09
CRLF3-202ENST00000577725 ZNF729A6NN14 1252 aaPredicted RBP8.25□□□□□ -1.09
CRLF3-202ENST00000577725 NPIPB11E5RHQ5 1161 aa8.25□□□□□ -1.09
CRLF3-202ENST00000577725 F2RL2O00254 374 aa8.25□□□□□ -1.09
CRLF3-202ENST00000577725 SLC31A2O15432 143 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms