RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 TNFAIP8L1Q8WVP5 186 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 ACY3Q96HD9 319 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 OR52B2Q96RD2 323 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 TBX5Q99593 518 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 NDEL1Q9GZM8 345 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 GTSF1LQ9H1H1 148 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 MS4A6AQ9H2W1 248 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 MRPL16Q9NX20 251 aaKnown RBP0.72□□□□□ -2.29
TOP2A-202ENST00000577541 CCL26Q9Y258 94 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 PUS1Q9Y606 427 aaKnown RBP eCLIP0.72□□□□□ -2.29
TOP2A-202ENST00000577541 MYO5BQ9ULV0 1848 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 CACNA1GO43497 2377 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 PLXNB1O43157 2135 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 REREQ9P2R6 1566 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 SLIT2O94813 1529 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 GOLGA8IPA6NC78 632 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 FTCDNL1E5RQL4 147 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 F5H5K5 113 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 F5H5T6 163 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 G3V3Q6 166 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 M0QYV0 167 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 MRASO14807 208 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 SYNGR2O43760 224 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 CALUO43852 315 aaPredicted RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 REG1AP05451 166 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 CCL3P10147 92 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 MLNP12872 115 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 RCVRNP35243 200 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 SPAM1P38567 509 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 HSPA9P38646 679 aaKnown RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 RPL14P50914 215 aaKnown RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 GABARAPL2P60520 117 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 FGF12P61328 243 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 HERVK_113P63121 156 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 C1DQ13901 141 aaKnown RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 CST6Q15828 149 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 USF2Q15853 346 aaPredicted RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 TBC1D28Q2M2D7 210 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 MRPL51Q4U2R6 128 aaKnown RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 PCOTHQ58A44 107 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 LGALS9CQ6DKI2 356 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 FAM45BPQ6NSW5 357 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 TTC33Q6PID6 262 aaPredicted RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 C2orf91Q6ZV80 131 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 LYZL2Q7Z4W2 148 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 PLCZ1Q86YW0 608 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 CD302Q8IX05 232 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 CPNE9Q8IYJ1 553 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 ACBD4Q8NC06 268 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 LFNGQ8NES3 379 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 CMTM2Q8TAZ6 248 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 C7orf50Q9BRJ6 194 aaKnown RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 TMEM208Q9BTX3 173 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 ZNF426Q9BUY5 554 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 C1QTNF6Q9BXI9 259 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 PARD6GQ9BYG4 376 aaPredicted RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 MED28Q9H204 178 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 C11orf1Q9H5F2 150 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 METTL8Q9H825 291 aaKnown RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 TAS2R9Q9NYW1 312 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 CHMP5Q9NZZ3 219 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 MCTS1Q9ULC4 181 aaKnown RBP0.71□□□□□ -2.3
TOP2A-202ENST00000577541 TP53TG1Q9Y2A0 90 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 HEY1Q9Y5J3 304 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 COL4A2P08572 1712 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 WDR90Q96KV7 1748 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 ATG2BQ96BY7 2078 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 DOCK6Q96HP0 2047 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 TRPM6Q9BX84 2022 aa0.71□□□□□ -2.3
TOP2A-202ENST00000577541 TMED7-TICAM2A0A0A6YYA0 188 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 TMEM213A2RRL7 107 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 A8MWP6 167 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 M0R381 172 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 ITGB1BP1O14713 200 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 BIRC5O15392 142 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 ZW10O43264 779 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 UGT2B11O75310 529 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 ARL6IP5O75915 188 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 LY6HO94772 140 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 GUSBP08236 651 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 COX5BP10606 129 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 ESDP10768 282 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 CD36P16671 472 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 AKR1C4P17516 323 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 ATF1P18846 271 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 PVALBP20472 110 aaPredicted RBP0.7□□□□□ -2.3
TOP2A-202ENST00000577541 CDK2P24941 298 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 CD40LGP29965 261 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 PPP1CCP36873 323 aaKnown RBP0.7□□□□□ -2.3
TOP2A-202ENST00000577541 REG1BP48304 166 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 SERPINB10P48595 397 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 PAFAH1B3Q15102 231 aaKnown RBP0.7□□□□□ -2.3
TOP2A-202ENST00000577541 PYCR3Q53H96 274 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 TMEM31Q5JXX7 168 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 PDPK2PQ6A1A2 396 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 LCN8Q6JVE9 175 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 FAM19A5Q7Z5A7 132 aaPredicted RBP0.7□□□□□ -2.3
TOP2A-202ENST00000577541 OR11H1Q8NG94 326 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 OR5L1Q8NGL2 311 aa0.7□□□□□ -2.3
TOP2A-202ENST00000577541 OR5AK3PQ8NH89 298 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms